Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RNF6P1-201ENST00000444889 1784 ntBASIC2.15□□□□□ -2.06
SCAPERQ9BY12 SNORA7.2-201ENST00000364446 145 ntBASIC2.15□□□□□ -2.07
SCAPERQ9BY12 SNRPEP2-201ENST00000397592 279 ntBASIC2.15□□□□□ -2.07
SCAPERQ9BY12 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.15□□□□□ -2.07
SCAPERQ9BY12 NCOR1P1-202ENST00000486162 291 ntBASIC2.15□□□□□ -2.07
SCAPERQ9BY12 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.15□□□□□ -2.07
SCAPERQ9BY12 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.15□□□□□ -2.07
SCAPERQ9BY12 AC034244.1-201ENST00000507687 207 ntBASIC2.15□□□□□ -2.07
SCAPERQ9BY12 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.15□□□□□ -2.07
SCAPERQ9BY12 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.15□□□□□ -2.07
SCAPERQ9BY12 MIR3660-201ENST00000584845 100 ntBASIC2.15□□□□□ -2.07
SCAPERQ9BY12 VN1R81P-201ENST00000602085 372 ntBASIC2.15□□□□□ -2.07
SCAPERQ9BY12 AC080078.3-201ENST00000605407 463 ntBASIC2.15□□□□□ -2.07
SCAPERQ9BY12 AC019131.2-201ENST00000609071 870 ntBASIC2.15□□□□□ -2.07
SCAPERQ9BY12 PVT1_3.1-201ENST00000620853 95 ntBASIC2.15□□□□□ -2.07
SCAPERQ9BY12 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.15□□□□□ -2.07
SCAPERQ9BY12 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.14□□□□□ -2.07
SCAPERQ9BY12 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.14□□□□□ -2.07
SCAPERQ9BY12 MIR1304-201ENST00000408243 91 ntBASIC2.14□□□□□ -2.07
SCAPERQ9BY12 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.14□□□□□ -2.07
SCAPERQ9BY12 IFNA20P-201ENST00000436840 528 ntBASIC2.14□□□□□ -2.07
SCAPERQ9BY12 RNA5SP471-201ENST00000516971 106 ntBASIC2.14□□□□□ -2.07
SCAPERQ9BY12 AC016957.1-201ENST00000534895 309 ntBASIC2.14□□□□□ -2.07
SCAPERQ9BY12 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.14□□□□□ -2.07
SCAPERQ9BY12 MIR6779-201ENST00000617283 64 ntBASIC2.14□□□□□ -2.07
SCAPERQ9BY12 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SCAPERQ9BY12 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SCAPERQ9BY12 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SCAPERQ9BY12 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SCAPERQ9BY12 U8.1-201ENST00000362843 134 ntBASIC2.13□□□□□ -2.07
SCAPERQ9BY12 RNU2-71P-201ENST00000411395 189 ntBASIC2.13□□□□□ -2.07
SCAPERQ9BY12 CALM1P2-201ENST00000452941 448 ntBASIC2.13□□□□□ -2.07
SCAPERQ9BY12 NF1P3-201ENST00000457709 450 ntBASIC2.13□□□□□ -2.07
SCAPERQ9BY12 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.13□□□□□ -2.07
SCAPERQ9BY12 AC004223.1-201ENST00000479840 271 ntBASIC2.13□□□□□ -2.07
SCAPERQ9BY12 HMGB3P17-201ENST00000504195 649 ntBASIC2.13□□□□□ -2.07
SCAPERQ9BY12 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.13□□□□□ -2.07
SCAPERQ9BY12 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SCAPERQ9BY12 IGKV2D-36-201ENST00000518643 226 ntBASIC2.13□□□□□ -2.07
SCAPERQ9BY12 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.13□□□□□ -2.07
SCAPERQ9BY12 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
SCAPERQ9BY12 AC084364.2-201ENST00000546924 395 ntBASIC2.13□□□□□ -2.07
SCAPERQ9BY12 AL161912.3-201ENST00000605404 628 ntBASIC2.13□□□□□ -2.07
SCAPERQ9BY12 STMN1P1-201ENST00000617809 440 ntBASIC2.13□□□□□ -2.07
SCAPERQ9BY12 AP003122.6-201ENST00000623831 495 ntBASIC2.13□□□□□ -2.07
SCAPERQ9BY12 MTND4P27-201ENST00000450813 1354 ntBASIC2.12□□□□□ -2.07
SCAPERQ9BY12 NUP58P1-201ENST00000502546 1738 ntBASIC2.12□□□□□ -2.07
SCAPERQ9BY12 AL365400.1-201ENST00000431854 640 ntBASIC2.12□□□□□ -2.07
SCAPERQ9BY12 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.12□□□□□ -2.07
SCAPERQ9BY12 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.12□□□□□ -2.07
SCAPERQ9BY12 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.12□□□□□ -2.07
SCAPERQ9BY12 RN7SKP234-201ENST00000517173 224 ntBASIC2.12□□□□□ -2.07
SCAPERQ9BY12 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SCAPERQ9BY12 SNORD84-203ENST00000584275 78 ntBASIC2.12□□□□□ -2.07
SCAPERQ9BY12 AL133507.1-201ENST00000605269 557 ntBASIC2.12□□□□□ -2.07
SCAPERQ9BY12 AL390240.1-201ENST00000612950 384 ntBASIC2.12□□□□□ -2.07
SCAPERQ9BY12 AC139769.3-201ENST00000618383 175 ntBASIC2.12□□□□□ -2.07
SCAPERQ9BY12 AC007275.1-201ENST00000621243 671 ntBASIC2.12□□□□□ -2.07
SCAPERQ9BY12 MIR6767-201ENST00000637302 66 ntBASIC2.12□□□□□ -2.07
SCAPERQ9BY12 AP000560.1-201ENST00000624150 1937 ntBASIC2.12□□□□□ -2.07
SCAPERQ9BY12 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
SCAPERQ9BY12 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SCAPERQ9BY12 SNORD114-26-201ENST00000363543 72 ntBASIC2.11□□□□□ -2.07
SCAPERQ9BY12 RNU4-72P-201ENST00000410754 173 ntBASIC2.11□□□□□ -2.07
SCAPERQ9BY12 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.11□□□□□ -2.07
SCAPERQ9BY12 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.11□□□□□ -2.07
SCAPERQ9BY12 ATG12P2-201ENST00000456830 416 ntBASIC2.11□□□□□ -2.07
SCAPERQ9BY12 RPL37P6-202ENST00000464216 403 ntBASIC2.11□□□□□ -2.07
SCAPERQ9BY12 RPS15AP17-201ENST00000470598 390 ntBASIC2.11□□□□□ -2.07
SCAPERQ9BY12 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.11□□□□□ -2.07
SCAPERQ9BY12 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.11□□□□□ -2.07
SCAPERQ9BY12 AF131216.2-201ENST00000512316 564 ntBASIC2.11□□□□□ -2.07
SCAPERQ9BY12 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.11□□□□□ -2.07
SCAPERQ9BY12 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.11□□□□□ -2.07
SCAPERQ9BY12 NBEAP1-201ENST00000554452 979 ntBASIC2.11□□□□□ -2.07
SCAPERQ9BY12 AL137100.2-201ENST00000555786 315 ntBASIC2.11□□□□□ -2.07
SCAPERQ9BY12 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.11□□□□□ -2.07
SCAPERQ9BY12 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.11□□□□□ -2.07
SCAPERQ9BY12 RPS15AP11-201ENST00000594193 385 ntBASIC2.11□□□□□ -2.07
SCAPERQ9BY12 AC245128.3-201ENST00000594721 748 ntBASIC2.11□□□□□ -2.07
SCAPERQ9BY12 AL355816.1-201ENST00000607951 118 ntBASIC2.11□□□□□ -2.07
SCAPERQ9BY12 AL110115.1-201ENST00000614396 364 ntBASIC2.11□□□□□ -2.07
SCAPERQ9BY12 uc_338.9-201ENST00000617424 182 ntBASIC2.11□□□□□ -2.07
SCAPERQ9BY12 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
SCAPERQ9BY12 AC004022.2-201ENST00000413824 193 ntBASIC2.1□□□□□ -2.07
SCAPERQ9BY12 AC241520.1-201ENST00000422654 1099 ntBASIC2.1□□□□□ -2.07
SCAPERQ9BY12 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.1□□□□□ -2.07
SCAPERQ9BY12 Z85994.2-201ENST00000434327 452 ntBASIC2.1□□□□□ -2.07
SCAPERQ9BY12 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SCAPERQ9BY12 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.1□□□□□ -2.07
SCAPERQ9BY12 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SCAPERQ9BY12 MTCYBP18-201ENST00000501056 747 ntBASIC2.1□□□□□ -2.07
SCAPERQ9BY12 AC083923.1-201ENST00000523708 376 ntBASIC2.1□□□□□ -2.07
SCAPERQ9BY12 CENPUP2-201ENST00000555897 1186 ntBASIC2.1□□□□□ -2.07
SCAPERQ9BY12 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.1□□□□□ -2.07
SCAPERQ9BY12 AC023813.2-201ENST00000564321 469 ntBASIC2.1□□□□□ -2.07
SCAPERQ9BY12 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.1□□□□□ -2.07
SCAPERQ9BY12 AC009090.3-201ENST00000616553 565 ntBASIC2.1□□□□□ -2.07
SCAPERQ9BY12 AP000648.3-201ENST00000623539 4507 ntBASIC2.1□□□□□ -2.07
SCAPERQ9BY12 MTCO1P4-201ENST00000520516 1409 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms