Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 MIR6731-201ENST00000614863 72 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 U2.9-201ENST00000615427 191 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 U2.11-201ENST00000616345 191 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 U2.2-201ENST00000616535 191 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 U2.3-201ENST00000617785 191 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 U2.19-201ENST00000618602 191 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 RNU2-1-201ENST00000618664 191 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 U2.6-201ENST00000619225 191 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 U2.5-201ENST00000619465 191 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 U2.10-201ENST00000620268 191 ntBASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSBP4Q9BWG4 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 ABCC13-202ENST00000463099 3842 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 Y_RNA.75-201ENST00000362927 97 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 RNA5SP375-201ENST00000362975 119 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 RNU6-626P-201ENST00000363354 107 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 Y_RNA.217-201ENST00000364214 105 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 AL353133.1-201ENST00000407695 401 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 RNA5SP487-201ENST00000410186 122 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 RNU6-1025P-201ENST00000410629 104 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 RPL7AP73-201ENST00000413490 353 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 WARS2P1-201ENST00000429678 537 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 AL512844.2-201ENST00000433990 593 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 TBCAP1-201ENST00000436520 327 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 AC009296.1-201ENST00000443146 155 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 FRG2FP-204ENST00000453982 852 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 Y_RNA.641-201ENST00000459414 105 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 RN7SL372P-201ENST00000461982 298 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 RPS10P28-201ENST00000480396 498 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 COX6B1P2-201ENST00000489624 230 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 AC020890.1-201ENST00000491837 504 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 AC104164.2-201ENST00000496953 495 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 RNU4-57P-201ENST00000515980 135 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 IGHVII-49-1-201ENST00000521760 224 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 BPIFA4P-203ENST00000603168 689 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 AC006254.2-201ENST00000603259 279 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 AL670379.2-201ENST00000604983 252 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 AC107294.1-201ENST00000609524 467 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 AL589743.6-201ENST00000611025 117 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 AL079305.1-201ENST00000623159 3008 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 AC097461.1-201ENST00000568928 2821 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 SMG1P7-201ENST00000565246 2704 ntBASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
SSBP4Q9BWG4 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 THAP12P5-201ENST00000405864 2275 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 AC104964.3-201ENST00000606115 2860 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 RNA5SP308-201ENST00000362532 115 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 RNU6-428P-201ENST00000362942 107 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 RNU6-1155P-201ENST00000363554 107 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 Y_RNA.182-201ENST00000363880 111 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 RN7SKP78-201ENST00000364711 318 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 RNU6-1175P-201ENST00000365200 107 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 Y_RNA.331-201ENST00000365267 102 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 RNU6-17P-201ENST00000384245 107 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 RNU6-18P-201ENST00000384527 107 ntBASIC4.43□□□□□ -1.7
SSBP4Q9BWG4 MIR301B-201ENST00000390813 78 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms