Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 SNORD84-203ENST00000584275 78 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 AP001981.2-201ENST00000603241 418 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 AC128687.1-201ENST00000605304 619 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 AL356585.4-201ENST00000623078 1229 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 AC025048.6-202ENST00000627667 438 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 AC093591.3-201ENST00000634516 308 ntBASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC28BQ9BUN5 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 U3.4-201ENST00000363352 213 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 RNU6-97P-201ENST00000363387 104 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 RNU5F-7P-201ENST00000363696 115 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 RNU6-1207P-201ENST00000384343 107 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 RNU6-1077P-201ENST00000410506 102 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 RPL19P1-201ENST00000411635 428 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 MTCO2P16-201ENST00000436962 677 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 AC091862.1-201ENST00000438016 1100 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 RPL7P36-201ENST00000444633 681 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 TAF9P1-201ENST00000445421 515 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 Z82190.1-201ENST00000454534 490 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 TAF9P2-201ENST00000454958 515 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 RPL7P15-201ENST00000461190 712 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 AP000797.1-201ENST00000478870 387 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 AC021382.1-201ENST00000483523 359 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 KLHL2P1-201ENST00000508691 521 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 AC116347.2-201ENST00000514912 523 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 Y_RNA.695-201ENST00000516715 107 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 AC018630.1-201ENST00000541376 925 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 MTCYBP33-201ENST00000575007 1130 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 AC012065.4-201ENST00000602445 679 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 U73023.1-201ENST00000603134 700 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 AC068276.1-201ENST00000605793 379 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 AC245008.1-201ENST00000608123 476 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 AL590282.1-201ENST00000610379 1136 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 AC025594.3-201ENST00000613068 790 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 AC011939.3-201ENST00000613686 466 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 AL355365.1-201ENST00000616480 294 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 AL034408.1-202ENST00000636088 415 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 AC068137.4-201ENST00000638485 296 ntBASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC28BQ9BUN5 AL390237.1-201ENST00000404226 1415 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 AC073325.2-201ENST00000339545 159 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 SNORD15B-201ENST00000384714 146 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 RNU6-712P-201ENST00000410558 100 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 RN7SKP263-201ENST00000411194 309 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 AC092447.6-201ENST00000414578 210 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 RPS7P15-201ENST00000415804 584 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 FAM103A2P-201ENST00000444122 354 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 AL360221.1-201ENST00000445989 335 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 RPL23AP20-201ENST00000447965 421 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 SNRPGP9-201ENST00000456025 225 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 AP1S2P1-201ENST00000457344 379 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 RN7SL385P-201ENST00000468873 276 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 AC110794.1-201ENST00000505816 425 ntBASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC28BQ9BUN5 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms