Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 MIR6817-201ENST00000615588 66 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 OR1S1-201ENST00000624470 978 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.42□□□□□ -2.02
FOXC2Q99958 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.42□□□□□ -2.02
FOXC2Q99958 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.42□□□□□ -2.02
FOXC2Q99958 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.42□□□□□ -2.02
FOXC2Q99958 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.42□□□□□ -2.02
FOXC2Q99958 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
FOXC2Q99958 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
FOXC2Q99958 SNORA51.4-201ENST00000364993 124 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 Y_RNA.472-201ENST00000384322 102 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 MTCO2P8-201ENST00000412213 658 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.41□□□□□ -2.02
FOXC2Q99958 AC245054.2-201ENST00000415639 319 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 Z75741.2-201ENST00000417272 1167 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 MRPS36P1-201ENST00000421291 307 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.41□□□□□ -2.02
FOXC2Q99958 AL590383.1-201ENST00000428602 75 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 OR2B8P-201ENST00000432841 938 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 NANOGP2-201ENST00000435391 727 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 AC129850.1-201ENST00000436203 508 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 UBE2D3P1-201ENST00000436669 444 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 HMGB1P18-201ENST00000438801 619 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 AL714022.1-201ENST00000439897 151 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 HMGB3P6-201ENST00000444896 598 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.41□□□□□ -2.02
FOXC2Q99958 NIPA2P5-201ENST00000452282 464 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 AC234775.1-201ENST00000454247 670 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 snoU13.23-201ENST00000458863 104 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 AC116337.2-201ENST00000477662 156 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 AC079203.1-201ENST00000487972 404 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 ANXA2P1-201ENST00000505539 926 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 POU5F1P7-201ENST00000508759 541 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 AC008549.1-201ENST00000512900 643 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.41□□□□□ -2.02
FOXC2Q99958 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.41□□□□□ -2.02
FOXC2Q99958 SLC2A13P1-201ENST00000531560 322 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 AP001429.1-201ENST00000602568 530 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 AC013553.2-201ENST00000604244 589 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 AC019159.1-201ENST00000605094 187 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.41□□□□□ -2.02
FOXC2Q99958 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.41□□□□□ -2.02
FOXC2Q99958 PART1_2.1-201ENST00000612397 250 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 AC016597.2-201ENST00000613256 341 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.41□□□□□ -2.02
FOXC2Q99958 AC002064.3-201ENST00000623448 346 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 AC068880.5-201ENST00000624331 290 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.41□□□□□ -2.02
FOXC2Q99958 ZNF519P1-201ENST00000449011 1626 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.41□□□□□ -2.02
FOXC2Q99958 MAPK10-266ENST00000641066 6555 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 ZNF658B-202ENST00000615961 3375 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 MTND5P7-201ENST00000413558 1798 ntBASIC2.41□□□□□ -2.02
FOXC2Q99958 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
FOXC2Q99958 AC093831.2-201ENST00000624393 3427 ntBASIC2.4□□□□□ -2.02
FOXC2Q99958 RNU6-28P-201ENST00000362378 107 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 Y_RNA.578-201ENST00000390903 88 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 RNA5SP21-201ENST00000410917 96 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 SPA17P1-201ENST00000416656 452 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 AC018630.2-202ENST00000422992 927 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 MTCO2P23-201ENST00000425216 680 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 AC109583.1-201ENST00000432156 268 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 ARPC3P1-201ENST00000437218 533 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 MTND4P6-201ENST00000438297 472 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 AL031313.1-201ENST00000448435 256 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 UQCRHP3-201ENST00000451503 251 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.4□□□□□ -2.03
FOXC2Q99958 RPS3P1-201ENST00000456781 192 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 AC108734.3-201ENST00000481241 1165 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.4□□□□□ -2.03
FOXC2Q99958 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.4□□□□□ -2.03
FOXC2Q99958 AC134050.1-201ENST00000495088 933 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 RPL21P131-201ENST00000497298 483 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.4□□□□□ -2.03
FOXC2Q99958 AC147055.4-201ENST00000504399 745 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.4□□□□□ -2.03
FOXC2Q99958 RNU6-583P-201ENST00000516012 92 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 RNU6-928P-201ENST00000516876 104 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 SCARNA20.6-201ENST00000517251 106 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.4□□□□□ -2.03
FOXC2Q99958 MTCO1P47-201ENST00000523889 1271 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 AP001372.4-201ENST00000524889 472 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 LRRC6P1-201ENST00000532188 885 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 AC125611.2-201ENST00000551907 647 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.4□□□□□ -2.03
FOXC2Q99958 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.4□□□□□ -2.03
FOXC2Q99958 MTND3P13-201ENST00000574391 343 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 VN1R83P-201ENST00000595685 445 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 RPP40P2-201ENST00000603596 712 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 AC015871.2-201ENST00000603605 948 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 AC011451.2-201ENST00000604303 598 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 AC024257.5-201ENST00000612739 531 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.4□□□□□ -2.03
FOXC2Q99958 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.4□□□□□ -2.03
FOXC2Q99958 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.4□□□□□ -2.03
FOXC2Q99958 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.4□□□□□ -2.03
FOXC2Q99958 LINC02211-204ENST00000642024 1070 ntBASIC2.4□□□□□ -2.03
FOXC2Q99958 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.4□□□□□ -2.03
FOXC2Q99958 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms