Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 MTND4P4-201ENST00000439033 1366 ntBASIC3.19□□□□□ -1.9
CPNE1Q99829 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CPNE1Q99829 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CPNE1Q99829 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CPNE1Q99829 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.19□□□□□ -1.9
CPNE1Q99829 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CPNE1Q99829 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.19□□□□□ -1.9
CPNE1Q99829 OR4G2P-202ENST00000641004 1759 ntBASIC3.18□□□□□ -1.9
CPNE1Q99829 AL049781.1-201ENST00000623195 3585 ntBASIC3.18□□□□□ -1.9
CPNE1Q99829 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CPNE1Q99829 RNU1-64P-201ENST00000365443 163 ntBASIC3.18□□□□□ -1.9
CPNE1Q99829 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CPNE1Q99829 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CPNE1Q99829 SNORA26.8-201ENST00000391306 124 ntBASIC3.18□□□□□ -1.9
CPNE1Q99829 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CPNE1Q99829 AL021407.1-201ENST00000404531 386 ntBASIC3.18□□□□□ -1.9
CPNE1Q99829 BX323014.1-201ENST00000412876 237 ntBASIC3.18□□□□□ -1.9
CPNE1Q99829 AC245054.2-201ENST00000415639 319 ntBASIC3.18□□□□□ -1.9
CPNE1Q99829 AC009518.2-201ENST00000418056 731 ntBASIC3.18□□□□□ -1.9
CPNE1Q99829 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.18□□□□□ -1.9
CPNE1Q99829 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.18□□□□□ -1.9
CPNE1Q99829 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.18□□□□□ -1.9
CPNE1Q99829 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.18□□□□□ -1.9
CPNE1Q99829 TRIM60P18-201ENST00000441518 828 ntBASIC3.18□□□□□ -1.9
CPNE1Q99829 RPL17P49-201ENST00000443728 411 ntBASIC3.18□□□□□ -1.9
CPNE1Q99829 COX6CP12-201ENST00000446748 202 ntBASIC3.18□□□□□ -1.9
CPNE1Q99829 UQCRHP3-201ENST00000451503 251 ntBASIC3.18□□□□□ -1.9
CPNE1Q99829 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.18□□□□□ -1.9
CPNE1Q99829 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.18□□□□□ -1.9
CPNE1Q99829 AC008481.1-201ENST00000463278 396 ntBASIC3.18□□□□□ -1.9
CPNE1Q99829 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.18□□□□□ -1.9
CPNE1Q99829 DEFB108A-201ENST00000530110 222 ntBASIC3.18□□□□□ -1.9
CPNE1Q99829 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.18□□□□□ -1.9
CPNE1Q99829 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.18□□□□□ -1.9
CPNE1Q99829 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.18□□□□□ -1.9
CPNE1Q99829 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.18□□□□□ -1.9
CPNE1Q99829 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.18□□□□□ -1.9
CPNE1Q99829 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.18□□□□□ -1.9
CPNE1Q99829 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.18□□□□□ -1.9
CPNE1Q99829 MIR4474-201ENST00000579189 78 ntBASIC3.18□□□□□ -1.9
CPNE1Q99829 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.18□□□□□ -1.9
CPNE1Q99829 AC093227.2-201ENST00000589357 285 ntBASIC3.18□□□□□ -1.9
CPNE1Q99829 AC012065.4-201ENST00000602445 679 ntBASIC3.18□□□□□ -1.9
CPNE1Q99829 AC008962.1-201ENST00000605729 304 ntBASIC3.18□□□□□ -1.9
CPNE1Q99829 U3.45-201ENST00000607547 219 ntBASIC3.18□□□□□ -1.9
CPNE1Q99829 AL355365.1-201ENST00000616480 294 ntBASIC3.18□□□□□ -1.9
CPNE1Q99829 AC068831.7-201ENST00000616954 363 ntBASIC3.18□□□□□ -1.9
CPNE1Q99829 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.18□□□□□ -1.9
CPNE1Q99829 AC010149.2-201ENST00000637608 315 ntBASIC3.18□□□□□ -1.9
CPNE1Q99829 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.18□□□□□ -1.9
CPNE1Q99829 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.18□□□□□ -1.9
CPNE1Q99829 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.17□□□□□ -1.9
CPNE1Q99829 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.17□□□□□ -1.9
CPNE1Q99829 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.17□□□□□ -1.9
CPNE1Q99829 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.17□□□□□ -1.9
CPNE1Q99829 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.17□□□□□ -1.9
CPNE1Q99829 RNU4-21P-201ENST00000362802 126 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 RNA5SP50-201ENST00000363731 107 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CPNE1Q99829 RNU1-39P-201ENST00000383897 165 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 MIR554-201ENST00000384874 96 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 RNU6-1197P-201ENST00000391183 107 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 Y_RNA.608-201ENST00000410647 95 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.17□□□□□ -1.9
CPNE1Q99829 RPL21P24-201ENST00000413752 448 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 NPM1P11-201ENST00000417106 855 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 CYCSP46-201ENST00000423569 204 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.17□□□□□ -1.9
CPNE1Q99829 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.17□□□□□ -1.9
CPNE1Q99829 TIMM9P1-201ENST00000436122 256 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 HMGN2P20-201ENST00000437531 273 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CPNE1Q99829 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.17□□□□□ -1.9
CPNE1Q99829 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.17□□□□□ -1.9
CPNE1Q99829 SNRPFP4-201ENST00000456366 242 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 RPS20P20-201ENST00000460498 340 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 AP002884.2-201ENST00000471647 395 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CPNE1Q99829 AC012181.1-201ENST00000479895 423 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.17□□□□□ -1.9
CPNE1Q99829 RNU1-45P-201ENST00000517191 141 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 AC022616.6-201ENST00000520479 119 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 AC007458.1-201ENST00000542812 373 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.17□□□□□ -1.9
CPNE1Q99829 AC123904.2-201ENST00000548059 300 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 AC124947.2-202ENST00000552735 133 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 KC877982.1-201ENST00000602313 470 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 AL606834.2-201ENST00000602954 668 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 AP001981.2-201ENST00000603241 418 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 AL590229.1-201ENST00000603497 542 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 AC121334.2-201ENST00000605387 271 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 AC245517.5-201ENST00000611529 162 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 SDR42E1P2-201ENST00000614861 481 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 AC010133.1-201ENST00000615809 842 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 AC090132.2-201ENST00000615881 347 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 MIR6076-201ENST00000617521 113 ntBASIC3.17□□□□□ -1.9
CPNE1Q99829 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.17□□□□□ -1.9
CPNE1Q99829 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CPNE1Q99829 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms