Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC020910.2-201ENST00000603635 610 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 AC010680.3-201ENST00000604215 520 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 RNA5SP108-201ENST00000605921 117 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 HMGN2P28-201ENST00000606102 262 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 MIR6716-201ENST00000613413 80 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNX18Q96RF0 AC099654.10-201ENST00000640395 161 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNX18Q96RF0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNX18Q96RF0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.81□□□□□ -1.8
SNX18Q96RF0 NCAPGP1-201ENST00000505112 1814 ntBASIC3.81□□□□□ -1.8
SNX18Q96RF0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.81□□□□□ -1.8
SNX18Q96RF0 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SNX18Q96RF0 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
SNX18Q96RF0 RNU6-845P-201ENST00000362578 103 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 RNU6-1155P-201ENST00000363554 107 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 SNORA62.1-201ENST00000364287 154 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 RNA5SP479-201ENST00000364858 117 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX18Q96RF0 MIR454-201ENST00000390180 115 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 SNORD37.1-201ENST00000390968 65 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 RNU6-332P-201ENST00000391193 108 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 RN7SKP177-201ENST00000410567 355 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 RN7SKP263-201ENST00000411194 309 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 UBE2FP1-201ENST00000416536 447 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 RPL17P36-201ENST00000420302 549 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 AL157831.1-201ENST00000426134 473 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 MTND1P14-201ENST00000427400 950 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.8□□□□□ -1.8
SNX18Q96RF0 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SNX18Q96RF0 AC005094.1-201ENST00000440420 368 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 AC016696.1-201ENST00000446949 318 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 RPS29P15-201ENST00000458329 171 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 RN7SL93P-201ENST00000463035 293 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 GMFBP1-201ENST00000467831 427 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 RPL7L1P8-201ENST00000469911 741 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 BTF3L4P4-201ENST00000506381 449 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 AC026801.2-201ENST00000515352 425 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SNX18Q96RF0 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX18Q96RF0 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.8□□□□□ -1.8
SNX18Q96RF0 AC063950.1-201ENST00000552036 308 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX18Q96RF0 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX18Q96RF0 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.8□□□□□ -1.8
SNX18Q96RF0 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.8□□□□□ -1.8
SNX18Q96RF0 AC010591.1-201ENST00000603941 649 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 AC087045.1-201ENST00000605856 382 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.8□□□□□ -1.8
SNX18Q96RF0 AL121757.2-201ENST00000611223 313 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.8□□□□□ -1.8
SNX18Q96RF0 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.8□□□□□ -1.8
SNX18Q96RF0 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX18Q96RF0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX18Q96RF0 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SNX18Q96RF0 OR4G1P-203ENST00000641984 1631 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 PRO1804-201ENST00000623780 2050 ntBASIC3.8□□□□□ -1.8
SNX18Q96RF0 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SNX18Q96RF0 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.8□□□□□ -1.8
SNX18Q96RF0 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNX18Q96RF0 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNX18Q96RF0 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNX18Q96RF0 ASNSP3-201ENST00000451989 1306 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 AC106871.1-201ENST00000568324 3102 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 MIR331-201ENST00000362302 94 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 RNU4-73P-201ENST00000363164 141 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 AL136372.1-201ENST00000403060 228 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 AL162578.1-201ENST00000406202 378 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 AC011933.1-201ENST00000413334 321 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 RPL30P2-201ENST00000414021 291 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 AC004975.1-201ENST00000428733 208 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 AC116533.1-201ENST00000459748 321 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 RN7SL98P-201ENST00000462271 300 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 RN7SL303P-201ENST00000469773 251 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 AC007537.2-201ENST00000472093 511 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 AC126389.1-201ENST00000477436 290 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 RN7SL810P-201ENST00000493031 276 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 AC093278.1-201ENST00000494700 600 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 AC116562.3-201ENST00000506136 177 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 SUMO2P20-201ENST00000520803 283 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.79□□□□□ -1.8
SNX18Q96RF0 AC068587.5-201ENST00000528506 175 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 OR5B10P-201ENST00000532869 642 ntBASIC3.79□□□□□ -1.8
SNX18Q96RF0 OR5BN1P-201ENST00000532955 829 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms