Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC245008.1-201ENST00000608123 476 ntBASIC3.3□□□□□ -1.88
CMTM3Q96MX0 AC109347.2-201ENST00000610220 349 ntBASIC3.3□□□□□ -1.88
CMTM3Q96MX0 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.3□□□□□ -1.88
CMTM3Q96MX0 OR5BE1P-202ENST00000641168 1176 ntBASIC3.3□□□□□ -1.88
CMTM3Q96MX0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CMTM3Q96MX0 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CMTM3Q96MX0 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CMTM3Q96MX0 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.29□□□□□ -1.88
CMTM3Q96MX0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CMTM3Q96MX0 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CMTM3Q96MX0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CMTM3Q96MX0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CMTM3Q96MX0 RNU6-1167P-201ENST00000363227 94 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 RNVU1-6-201ENST00000364688 164 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 SNORA14A-201ENST00000364773 135 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 RNU6-217P-201ENST00000384164 104 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 RNU6-348P-201ENST00000384386 107 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 RNU6-14P-201ENST00000384630 106 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 RNA5SP252-201ENST00000391131 119 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 OR6C69P-201ENST00000394268 893 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 AL139397.2-201ENST00000404529 772 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.29□□□□□ -1.88
CMTM3Q96MX0 AC011933.1-201ENST00000413334 321 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 BTF3L4P3-201ENST00000418879 476 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 HSPE1P1-201ENST00000421494 318 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.29□□□□□ -1.88
CMTM3Q96MX0 OR2AS1P-201ENST00000427827 319 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 HMGB1P27-201ENST00000431429 603 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.29□□□□□ -1.88
CMTM3Q96MX0 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.29□□□□□ -1.88
CMTM3Q96MX0 AC010099.1-201ENST00000455434 375 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 MTCO2P18-201ENST00000457151 658 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 RPL23AP24-201ENST00000458203 385 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 AC116533.1-201ENST00000459748 321 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.29□□□□□ -1.88
CMTM3Q96MX0 RNU6-928P-201ENST00000516876 104 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.29□□□□□ -1.88
CMTM3Q96MX0 AP002963.1-201ENST00000530590 184 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.29□□□□□ -1.88
CMTM3Q96MX0 YPEL5P3-201ENST00000547227 352 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 AC006960.3-201ENST00000561845 705 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 MIR4528-201ENST00000577763 90 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.29□□□□□ -1.88
CMTM3Q96MX0 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.29□□□□□ -1.88
CMTM3Q96MX0 AC006504.3-201ENST00000586818 523 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 AC067852.3-201ENST00000589177 561 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 AC136601.2-201ENST00000604356 474 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 AP002360.4-201ENST00000606980 481 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 MIR6868-201ENST00000611215 58 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 AC093783.1-201ENST00000612976 329 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 AC138932.5-201ENST00000617759 563 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 AC009509.4-201ENST00000619202 509 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 AC007998.5-201ENST00000622938 237 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 AL732618.1-201ENST00000623251 301 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.29□□□□□ -1.88
CMTM3Q96MX0 AP003399.1-201ENST00000637534 361 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 CR848007.1-201ENST00000442354 1699 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CMTM3Q96MX0 AC233263.6-201ENST00000631132 1963 ntBASIC3.29□□□□□ -1.88
CMTM3Q96MX0 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.28□□□□□ -1.88
CMTM3Q96MX0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CMTM3Q96MX0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
CMTM3Q96MX0 MAPK10-322ENST00000641485 4530 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CMTM3Q96MX0 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CMTM3Q96MX0 RNA5SP447-201ENST00000363749 119 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CMTM3Q96MX0 RNU6-55P-201ENST00000411092 107 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 RNU6-954P-201ENST00000411355 107 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AC016397.1-201ENST00000412463 242 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 CDK8P2-201ENST00000415020 547 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.28□□□□□ -1.88
CMTM3Q96MX0 MRPL50P2-201ENST00000416821 482 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 C1DP2-201ENST00000418167 426 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AL158071.1-201ENST00000430315 461 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AL353706.1-201ENST00000436728 494 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 ARPC3P1-201ENST00000437218 533 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AC034236.1-201ENST00000469891 373 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AL132838.2-201ENST00000492041 314 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AC079140.3-201ENST00000511111 550 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.28□□□□□ -1.88
CMTM3Q96MX0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 RNA5SP164-201ENST00000516533 110 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 RNA5SP290-201ENST00000517133 127 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 RANP9-201ENST00000519957 271 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 HMGB1P41-201ENST00000520234 440 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AP000867.2-201ENST00000532468 320 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.28□□□□□ -1.88
CMTM3Q96MX0 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AC087883.1-201ENST00000551882 391 ntBASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.28□□□□□ -1.88
CMTM3Q96MX0 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms