Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC7Q96M83 AC113420.1-201ENST00000507903 571 ntBASIC3.17□□□□□ -1.9
CCDC7Q96M83 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC7Q96M83 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC7Q96M83 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC7Q96M83 AC005951.1-201ENST00000576706 485 ntBASIC3.17□□□□□ -1.9
CCDC7Q96M83 AC010738.1-201ENST00000604970 987 ntBASIC3.17□□□□□ -1.9
CCDC7Q96M83 AC023158.2-201ENST00000614876 543 ntBASIC3.17□□□□□ -1.9
CCDC7Q96M83 AL136981.2-201ENST00000617319 734 ntBASIC3.17□□□□□ -1.9
CCDC7Q96M83 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.17□□□□□ -1.9
CCDC7Q96M83 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC7Q96M83 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC7Q96M83 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
CCDC7Q96M83 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CCDC7Q96M83 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CCDC7Q96M83 SNORD51-201ENST00000384320 80 ntBASIC3.16□□□□□ -1.9
CCDC7Q96M83 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC7Q96M83 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC7Q96M83 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC7Q96M83 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC7Q96M83 RPS26P21-201ENST00000475397 348 ntBASIC3.16□□□□□ -1.9
CCDC7Q96M83 AC096751.1-202ENST00000502691 1067 ntBASIC3.16□□□□□ -1.9
CCDC7Q96M83 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC7Q96M83 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC7Q96M83 RN7SKP31-201ENST00000516354 278 ntBASIC3.16□□□□□ -1.9
CCDC7Q96M83 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC7Q96M83 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC7Q96M83 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC7Q96M83 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC7Q96M83 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC7Q96M83 MTCYBP23-201ENST00000558717 1102 ntBASIC3.16□□□□□ -1.9
CCDC7Q96M83 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC7Q96M83 AC105137.2-201ENST00000569073 466 ntBASIC3.16□□□□□ -1.9
CCDC7Q96M83 AL139022.2-201ENST00000606934 443 ntBASIC3.16□□□□□ -1.9
CCDC7Q96M83 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC7Q96M83 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC7Q96M83 AC131902.3-201ENST00000611767 581 ntBASIC3.16□□□□□ -1.9
CCDC7Q96M83 AL138478.1-201ENST00000612252 832 ntBASIC3.16□□□□□ -1.9
CCDC7Q96M83 AC104237.2-201ENST00000612456 443 ntBASIC3.16□□□□□ -1.9
CCDC7Q96M83 AC022306.3-201ENST00000619930 550 ntBASIC3.16□□□□□ -1.9
CCDC7Q96M83 AC099654.9-201ENST00000637055 678 ntBASIC3.16□□□□□ -1.9
CCDC7Q96M83 LINC02211-204ENST00000642024 1070 ntBASIC3.16□□□□□ -1.9
CCDC7Q96M83 AC104454.1-201ENST00000421341 1401 ntBASIC3.16□□□□□ -1.9
CCDC7Q96M83 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC7Q96M83 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC7Q96M83 ZNF72P-201ENST00000425869 1908 ntBASIC3.16□□□□□ -1.9
CCDC7Q96M83 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CCDC7Q96M83 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC7Q96M83 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC7Q96M83 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.15□□□□□ -1.9
CCDC7Q96M83 MIR591-201ENST00000385290 95 ntBASIC3.15□□□□□ -1.9
CCDC7Q96M83 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
CCDC7Q96M83 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.15□□□□□ -1.9
CCDC7Q96M83 AC099677.1-201ENST00000420575 175 ntBASIC3.15□□□□□ -1.9
CCDC7Q96M83 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.15□□□□□ -1.9
CCDC7Q96M83 CR769767.1-201ENST00000436337 346 ntBASIC3.15□□□□□ -1.9
CCDC7Q96M83 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.15□□□□□ -1.9
CCDC7Q96M83 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.15□□□□□ -1.9
CCDC7Q96M83 OFD1P3Y-201ENST00000453312 783 ntBASIC3.15□□□□□ -1.9
CCDC7Q96M83 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.15□□□□□ -1.9
CCDC7Q96M83 RPL23AP49-201ENST00000492925 468 ntBASIC3.15□□□□□ -1.9
CCDC7Q96M83 MLLT10P2-201ENST00000506434 249 ntBASIC3.15□□□□□ -1.9
CCDC7Q96M83 AC008716.1-201ENST00000511084 513 ntBASIC3.15□□□□□ -1.9
CCDC7Q96M83 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.15□□□□□ -1.9
CCDC7Q96M83 RNA5SP468-201ENST00000516782 93 ntBASIC3.15□□□□□ -1.9
CCDC7Q96M83 AC025881.1-201ENST00000518851 512 ntBASIC3.15□□□□□ -1.9
CCDC7Q96M83 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.15□□□□□ -1.9
CCDC7Q96M83 ATP5F1P5-201ENST00000526403 760 ntBASIC3.15□□□□□ -1.9
CCDC7Q96M83 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.15□□□□□ -1.9
CCDC7Q96M83 AP000867.2-201ENST00000532468 320 ntBASIC3.15□□□□□ -1.9
CCDC7Q96M83 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.15□□□□□ -1.9
CCDC7Q96M83 FAM35CP-201ENST00000554755 2470 ntBASIC3.15□□□□□ -1.9
CCDC7Q96M83 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC7Q96M83 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.15□□□□□ -1.9
CCDC7Q96M83 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
CCDC7Q96M83 AC245036.5-201ENST00000596330 847 ntBASIC3.15□□□□□ -1.9
CCDC7Q96M83 AC021749.1-201ENST00000604322 607 ntBASIC3.15□□□□□ -1.9
CCDC7Q96M83 AL136370.1-201ENST00000608166 691 ntBASIC3.15□□□□□ -1.9
CCDC7Q96M83 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
CCDC7Q96M83 AC004696.1-201ENST00000614345 607 ntBASIC3.15□□□□□ -1.9
CCDC7Q96M83 AL121895.2-201ENST00000619558 447 ntBASIC3.15□□□□□ -1.9
CCDC7Q96M83 MIR1322-201ENST00000638013 71 ntBASIC3.15□□□□□ -1.9
CCDC7Q96M83 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
CCDC7Q96M83 AC007256.1-201ENST00000392253 2765 ntBASIC3.15□□□□□ -1.91
CCDC7Q96M83 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CCDC7Q96M83 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CCDC7Q96M83 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC7Q96M83 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC7Q96M83 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CCDC7Q96M83 Y_RNA.408-201ENST00000383987 102 ntBASIC3.14□□□□□ -1.91
CCDC7Q96M83 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.14□□□□□ -1.91
CCDC7Q96M83 SRIP2-201ENST00000428470 166 ntBASIC3.14□□□□□ -1.91
CCDC7Q96M83 RABEPKP1-201ENST00000440529 1026 ntBASIC3.14□□□□□ -1.91
CCDC7Q96M83 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CCDC7Q96M83 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC7Q96M83 AC026410.2-201ENST00000460281 156 ntBASIC3.14□□□□□ -1.91
CCDC7Q96M83 RPS15AP17-201ENST00000470598 390 ntBASIC3.14□□□□□ -1.91
CCDC7Q96M83 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC7Q96M83 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC7Q96M83 HMGB1P28-201ENST00000507778 552 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms