Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 RNU6-657P-201ENST00000383904 107 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 U8.13-201ENST00000390842 128 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 RNU2-15P-201ENST00000410692 191 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.87□□□□□ -1.95
USP47Q96K76 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.87□□□□□ -1.95
USP47Q96K76 ISCA1P6-201ENST00000427740 390 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
USP47Q96K76 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.87□□□□□ -1.95
USP47Q96K76 RPL23AP7-203ENST00000449021 469 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.87□□□□□ -1.95
USP47Q96K76 MRPL42P4-201ENST00000453267 443 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 AL109741.2-201ENST00000455561 343 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 AC072039.1-201ENST00000477611 581 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.87□□□□□ -1.95
USP47Q96K76 RNU5A-7P-201ENST00000515979 116 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 RNU6-1095P-201ENST00000516148 108 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.87□□□□□ -1.95
USP47Q96K76 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.87□□□□□ -1.95
USP47Q96K76 AL136520.1-202ENST00000555494 763 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.87□□□□□ -1.95
USP47Q96K76 AC122134.1-202ENST00000569111 1201 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.87□□□□□ -1.95
USP47Q96K76 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.87□□□□□ -1.95
USP47Q96K76 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.87□□□□□ -1.95
USP47Q96K76 AC068880.4-201ENST00000623082 495 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.87□□□□□ -1.95
USP47Q96K76 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.87□□□□□ -1.95
USP47Q96K76 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
USP47Q96K76 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
USP47Q96K76 AL035405.1-201ENST00000400795 710 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 RNU2-28P-201ENST00000410457 189 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 RNU6-1077P-201ENST00000410506 102 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 AC027644.1-201ENST00000419595 298 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 RPL21P32-201ENST00000419877 477 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 MTATP6P4-201ENST00000427725 675 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 AL445646.1-201ENST00000431784 216 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 TRIM60P18-201ENST00000441518 828 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.87□□□□□ -1.95
USP47Q96K76 RNA5SP310-201ENST00000459084 116 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.87□□□□□ -1.95
USP47Q96K76 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.87□□□□□ -1.95
USP47Q96K76 AC068339.2-201ENST00000534395 618 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 AC008127.2-201ENST00000549925 1075 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 LARP7P2-201ENST00000575306 125 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.87□□□□□ -1.95
USP47Q96K76 AC010738.1-201ENST00000604970 987 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 Y_RNA.783-201ENST00000613546 102 ntBASIC2.87□□□□□ -1.95
USP47Q96K76 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.87□□□□□ -1.95
USP47Q96K76 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.86□□□□□ -1.95
USP47Q96K76 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
USP47Q96K76 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
USP47Q96K76 ZNF355P-201ENST00000427301 3216 ntBASIC2.86□□□□□ -1.95
USP47Q96K76 MTCO1P23-201ENST00000415223 1526 ntBASIC2.86□□□□□ -1.95
USP47Q96K76 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
USP47Q96K76 AC012321.1-201ENST00000561622 1588 ntBASIC2.86□□□□□ -1.95
USP47Q96K76 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
USP47Q96K76 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.86□□□□□ -1.95
USP47Q96K76 AC022336.2-201ENST00000568966 2538 ntBASIC2.86□□□□□ -1.95
USP47Q96K76 Y_RNA.4-201ENST00000362333 112 ntBASIC2.86□□□□□ -1.95
USP47Q96K76 Y_RNA.140-201ENST00000363474 103 ntBASIC2.86□□□□□ -1.95
USP47Q96K76 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.86□□□□□ -1.95
USP47Q96K76 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
USP47Q96K76 AC233728.2-201ENST00000425348 757 ntBASIC2.86□□□□□ -1.95
USP47Q96K76 MTCO3P30-201ENST00000426425 670 ntBASIC2.86□□□□□ -1.95
USP47Q96K76 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.86□□□□□ -1.95
USP47Q96K76 AL589880.1-201ENST00000448271 287 ntBASIC2.86□□□□□ -1.95
USP47Q96K76 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.86□□□□□ -1.95
USP47Q96K76 GTF2IP9-201ENST00000502460 301 ntBASIC2.86□□□□□ -1.95
USP47Q96K76 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.86□□□□□ -1.95
USP47Q96K76 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.86□□□□□ -1.95
USP47Q96K76 SNORD59.2-201ENST00000516873 68 ntBASIC2.86□□□□□ -1.95
USP47Q96K76 AP001804.3-201ENST00000525146 880 ntBASIC2.86□□□□□ -1.95
USP47Q96K76 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.86□□□□□ -1.95
USP47Q96K76 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.86□□□□□ -1.95
USP47Q96K76 MTCYBP27-201ENST00000555160 670 ntBASIC2.86□□□□□ -1.95
USP47Q96K76 MED28P6-201ENST00000558776 231 ntBASIC2.86□□□□□ -1.95
USP47Q96K76 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
USP47Q96K76 AP000942.3-201ENST00000603702 160 ntBASIC2.86□□□□□ -1.95
USP47Q96K76 AC009220.3-201ENST00000604318 586 ntBASIC2.86□□□□□ -1.95
USP47Q96K76 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.86□□□□□ -1.95
USP47Q96K76 AL353748.2-201ENST00000622148 471 ntBASIC2.86□□□□□ -1.95
USP47Q96K76 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.86□□□□□ -1.95
USP47Q96K76 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.85□□□□□ -1.95
USP47Q96K76 AC011460.1-201ENST00000636268 1834 ntBASIC2.85□□□□□ -1.95
USP47Q96K76 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.85□□□□□ -1.95
USP47Q96K76 CKAP2P1-201ENST00000555477 2049 ntBASIC2.85□□□□□ -1.95
USP47Q96K76 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
USP47Q96K76 RNA5SP160-201ENST00000364866 120 ntBASIC2.85□□□□□ -1.95
USP47Q96K76 SNORA80E-201ENST00000384744 137 ntBASIC2.85□□□□□ -1.95
USP47Q96K76 SNORA26.9-201ENST00000391322 122 ntBASIC2.85□□□□□ -1.95
USP47Q96K76 AL355615.1-201ENST00000406187 641 ntBASIC2.85□□□□□ -1.95
USP47Q96K76 AC004866.2-201ENST00000438285 481 ntBASIC2.85□□□□□ -1.95
USP47Q96K76 AC092393.1-201ENST00000439625 742 ntBASIC2.85□□□□□ -1.95
USP47Q96K76 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.85□□□□□ -1.95
USP47Q96K76 AP000852.1-201ENST00000472460 573 ntBASIC2.85□□□□□ -1.95
USP47Q96K76 BOLA3P3-201ENST00000505182 232 ntBASIC2.85□□□□□ -1.95
USP47Q96K76 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.85□□□□□ -1.95
USP47Q96K76 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.85□□□□□ -1.95
USP47Q96K76 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.85□□□□□ -1.95
USP47Q96K76 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms