Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 AC090543.2-201ENST00000483963 348 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 AC004057.1-201ENST00000485827 348 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 HMGN1P12-201ENST00000499125 195 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 MIR2116-201ENST00000517221 80 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 BNIP3P5-201ENST00000562290 498 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 AC018638.8-201ENST00000588755 281 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 AC010525.2-201ENST00000590920 195 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 AL022099.1-201ENST00000604551 712 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 MIR6867-201ENST00000610636 67 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 MIR6868-201ENST00000611215 58 ntBASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CTHRC1Q96CG8 AC008725.1-201ENST00000605123 2263 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 OR4G1P-203ENST00000641984 1631 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 RN7SKP44-201ENST00000363602 316 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 RNU6-188P-201ENST00000364207 107 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 Y_RNA.279-201ENST00000364763 95 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 AC110754.1-201ENST00000399740 601 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 AL359634.1-202ENST00000404721 284 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 MIR1193-201ENST00000408109 78 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 RNU2-41P-201ENST00000410991 178 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 AC009161.1-201ENST00000417306 376 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 CYP4F29P-201ENST00000420685 446 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 AC011742.1-201ENST00000431448 434 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 CYCSP43-201ENST00000438233 310 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 RPL7L1P8-201ENST00000469911 741 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 RPL31P61-201ENST00000496160 376 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 RPL23AP55-201ENST00000498163 452 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 EIF4EP3-201ENST00000498782 656 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 AP004371.1-201ENST00000525240 214 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 AC091516.1-201ENST00000549191 703 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 BNIP3P6-201ENST00000549284 499 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 OR4H12P-201ENST00000556269 907 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 AC025034.2-201ENST00000623264 286 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 AC004972.1-201ENST00000623934 2209 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 AL137003.2-201ENST00000606924 2538 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 MAPK10-253ENST00000641010 4072 ntBASIC3.75□□□□□ -1.81
CTHRC1Q96CG8 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 SNORD74.4-201ENST00000364129 80 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms