Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.49□□□□□ -1.69
CHMP4CQ96CF2 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 SNORA3.3-201ENST00000408712 125 ntBASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 AC073464.1-201ENST00000429823 534 ntBASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 VDAC1P3-201ENST00000434069 851 ntBASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 AL451074.3-201ENST00000437709 472 ntBASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 AL138799.3-201ENST00000438968 350 ntBASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 AC016696.1-201ENST00000446949 318 ntBASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 ANP32BP2-201ENST00000454525 545 ntBASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 AC034236.1-201ENST00000469891 373 ntBASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 TRBV12-2-201ENST00000489763 344 ntBASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 HMGB1P29-201ENST00000505659 499 ntBASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 GMPSP1-201ENST00000514075 579 ntBASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 RNU6-506P-201ENST00000516553 94 ntBASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 FAM60DP-201ENST00000524174 632 ntBASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 SNHG22-203ENST00000617833 660 ntBASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 AC244100.1-202ENST00000621554 382 ntBASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 FRG1KP-201ENST00000623592 341 ntBASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 AP004289.2-201ENST00000444413 1457 ntBASIC4.48□□□□□ -1.69
CHMP4CQ96CF2 AC006504.1-201ENST00000562493 3666 ntBASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 OR5J1P-201ENST00000313544 939 ntBASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 RNU6-181P-201ENST00000363225 107 ntBASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 SNORD56.2-201ENST00000363242 71 ntBASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 AC110754.1-201ENST00000399740 601 ntBASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 SNORA57.3-201ENST00000411095 141 ntBASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 RNU2-71P-201ENST00000411395 189 ntBASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 RHEBP3-201ENST00000411920 351 ntBASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 RPL26P6-201ENST00000440913 438 ntBASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 AC140076.1-201ENST00000449897 361 ntBASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 RN7SL330P-201ENST00000469709 307 ntBASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 AC004924.1-201ENST00000480160 781 ntBASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 AC007182.2-201ENST00000489251 402 ntBASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 AC023194.1-201ENST00000493084 308 ntBASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 RNU7-51P-201ENST00000516560 62 ntBASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 RNU6-445P-201ENST00000516949 107 ntBASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 AC100870.1-201ENST00000522035 505 ntBASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 CYCSP30-201ENST00000546447 172 ntBASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 OR4H12P-201ENST00000556269 907 ntBASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 RPL21P12-201ENST00000559810 515 ntBASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 AC006116.10-201ENST00000591836 581 ntBASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 AC103710.2-201ENST00000609912 942 ntBASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 AC005344.1-201ENST00000613391 459 ntBASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 AC092628.2-201ENST00000622492 339 ntBASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.47□□□□□ -1.69
CHMP4CQ96CF2 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CHMP4CQ96CF2 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
CHMP4CQ96CF2 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
CHMP4CQ96CF2 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 SNORA71.3-201ENST00000362582 128 ntBASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 RNU5A-1-201ENST00000362698 116 ntBASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 RNU1-18P-201ENST00000363062 164 ntBASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 RNU4-55P-201ENST00000410731 137 ntBASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 AC093578.1-201ENST00000415219 368 ntBASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 AC068533.1-201ENST00000418542 415 ntBASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 AL159169.1-201ENST00000421119 127 ntBASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 RPL21P109-201ENST00000422213 475 ntBASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 RPL7L1P10-201ENST00000427790 463 ntBASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 RPS27AP1-201ENST00000475545 471 ntBASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 RAC1P2-201ENST00000511164 579 ntBASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 RN7SKP83-201ENST00000516512 178 ntBASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 RN7SKP244-201ENST00000516513 307 ntBASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 SNORA31.22-201ENST00000517204 135 ntBASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.46□□□□□ -1.7
CHMP4CQ96CF2 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms