Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 RNU6-1097P-201ENST00000363586 107 ntBASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 CALM2P3-201ENST00000400429 449 ntBASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 RPL21P24-201ENST00000413752 448 ntBASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 AC017083.1-201ENST00000428093 483 ntBASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 AL139415.2-201ENST00000431968 163 ntBASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 USP9YP7-201ENST00000436723 430 ntBASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 AL662791.1-201ENST00000441992 928 ntBASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 USP9YP32-201ENST00000452432 430 ntBASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 AC022364.2-201ENST00000457963 554 ntBASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 UBE2DNL-203ENST00000474922 222 ntBASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 MLLT10P2-201ENST00000506434 249 ntBASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 AC009646.1-201ENST00000510455 318 ntBASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 AC105914.1-201ENST00000511798 226 ntBASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 RNU7-51P-201ENST00000516560 62 ntBASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 RNU6-1220P-201ENST00000517126 108 ntBASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 AC128657.1-201ENST00000549459 145 ntBASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 AC010928.3-201ENST00000587712 541 ntBASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 AC006077.1-201ENST00000604746 343 ntBASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 SNORA62.6-201ENST00000606322 83 ntBASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 AC079684.1-201ENST00000621405 437 ntBASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 AL353748.2-201ENST00000622148 471 ntBASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TRIM43Q96BQ3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 RNU6-1085P-201ENST00000363576 107 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 SNORA38.1-201ENST00000364172 131 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 RNU6-173P-201ENST00000364215 104 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 RNU6-108P-201ENST00000365558 107 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 SNORA48.5-201ENST00000391143 135 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 CIR1P3-201ENST00000405137 479 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 MTATP6P18-201ENST00000417994 673 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AC004552.1-201ENST00000419089 348 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 MTCO2P19-201ENST00000427513 598 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 MRPS10P2-201ENST00000431226 381 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AC090774.1-201ENST00000435925 246 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AC016696.1-201ENST00000446949 318 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 RBMY2UP-201ENST00000453474 324 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AC008481.1-201ENST00000463278 396 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 RPS26P3-201ENST00000470205 348 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AC090543.2-201ENST00000483963 348 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AC004057.1-201ENST00000485827 348 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 DEFB109F-201ENST00000491870 277 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 KLHL2P1-201ENST00000508691 521 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AC023141.12-201ENST00000512399 199 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AC090572.1-201ENST00000519251 160 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 FAM60DP-201ENST00000524174 632 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AP003072.2-201ENST00000527756 676 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AP003034.1-201ENST00000534621 422 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AC105224.1-201ENST00000587055 421 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AC098848.2-201ENST00000588023 330 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 SLC25A36P1-201ENST00000590111 465 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AC012493.2-201ENST00000595083 291 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AL391646.1-201ENST00000603860 190 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 Z84480.1-201ENST00000605131 311 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AC103710.2-201ENST00000609912 942 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AC139792.3-201ENST00000623525 224 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 FRG1KP-201ENST00000623592 341 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 AC009161.2-201ENST00000624626 138 ntBASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM43Q96BQ3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms