Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RN7SKP280-201ENST00000364196 304 ntBASIC3.19□□□□□ -1.9
VPS33AQ96AX1 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS33AQ96AX1 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.19□□□□□ -1.9
VPS33AQ96AX1 AL365203.2-201ENST00000423444 196 ntBASIC3.19□□□□□ -1.9
VPS33AQ96AX1 CYCSP4-201ENST00000429682 331 ntBASIC3.19□□□□□ -1.9
VPS33AQ96AX1 AL445584.1-201ENST00000431451 330 ntBASIC3.19□□□□□ -1.9
VPS33AQ96AX1 ATP5JP1-201ENST00000431631 322 ntBASIC3.19□□□□□ -1.9
VPS33AQ96AX1 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS33AQ96AX1 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.19□□□□□ -1.9
VPS33AQ96AX1 AC118469.1-201ENST00000442943 488 ntBASIC3.19□□□□□ -1.9
VPS33AQ96AX1 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS33AQ96AX1 SNORD105B-201ENST00000458770 79 ntBASIC3.19□□□□□ -1.9
VPS33AQ96AX1 MTND4LP3-201ENST00000468320 276 ntBASIC3.19□□□□□ -1.9
VPS33AQ96AX1 BZW1P2-201ENST00000473537 826 ntBASIC3.19□□□□□ -1.9
VPS33AQ96AX1 AC138853.1-201ENST00000503549 823 ntBASIC3.19□□□□□ -1.9
VPS33AQ96AX1 AC006499.5-201ENST00000505037 514 ntBASIC3.19□□□□□ -1.9
VPS33AQ96AX1 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
VPS33AQ96AX1 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
VPS33AQ96AX1 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS33AQ96AX1 RN7SKP21-201ENST00000516503 220 ntBASIC3.19□□□□□ -1.9
VPS33AQ96AX1 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS33AQ96AX1 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS33AQ96AX1 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS33AQ96AX1 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS33AQ96AX1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS33AQ96AX1 MIR3146-201ENST00000580367 79 ntBASIC3.19□□□□□ -1.9
VPS33AQ96AX1 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.19□□□□□ -1.9
VPS33AQ96AX1 AC006557.5-201ENST00000603126 811 ntBASIC3.19□□□□□ -1.9
VPS33AQ96AX1 AC136601.2-201ENST00000604356 474 ntBASIC3.19□□□□□ -1.9
VPS33AQ96AX1 AC008277.2-201ENST00000605196 797 ntBASIC3.19□□□□□ -1.9
VPS33AQ96AX1 AL136295.6-201ENST00000610486 658 ntBASIC3.19□□□□□ -1.9
VPS33AQ96AX1 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS33AQ96AX1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.19□□□□□ -1.9
VPS33AQ96AX1 AL445523.1-201ENST00000451184 1362 ntBASIC3.19□□□□□ -1.9
VPS33AQ96AX1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
VPS33AQ96AX1 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS33AQ96AX1 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VPS33AQ96AX1 FAM35CP-201ENST00000554755 2470 ntBASIC3.18□□□□□ -1.9
VPS33AQ96AX1 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS33AQ96AX1 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
VPS33AQ96AX1 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS33AQ96AX1 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS33AQ96AX1 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS33AQ96AX1 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS33AQ96AX1 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS33AQ96AX1 RNU6-140P-201ENST00000384566 108 ntBASIC3.18□□□□□ -1.9
VPS33AQ96AX1 RNA5SP44-201ENST00000410446 133 ntBASIC3.18□□□□□ -1.9
VPS33AQ96AX1 RNU2-62P-201ENST00000410868 191 ntBASIC3.18□□□□□ -1.9
VPS33AQ96AX1 Y_RNA.625-201ENST00000411256 107 ntBASIC3.18□□□□□ -1.9
VPS33AQ96AX1 ELOCP17-201ENST00000414751 326 ntBASIC3.18□□□□□ -1.9
VPS33AQ96AX1 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.18□□□□□ -1.9
VPS33AQ96AX1 RPL32P35-201ENST00000415214 394 ntBASIC3.18□□□□□ -1.9
VPS33AQ96AX1 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS33AQ96AX1 ARPC3P1-201ENST00000437218 533 ntBASIC3.18□□□□□ -1.9
VPS33AQ96AX1 RPL22P17-201ENST00000438729 315 ntBASIC3.18□□□□□ -1.9
VPS33AQ96AX1 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.18□□□□□ -1.9
VPS33AQ96AX1 AC073387.1-201ENST00000453261 709 ntBASIC3.18□□□□□ -1.9
VPS33AQ96AX1 RNU7-125P-201ENST00000458760 62 ntBASIC3.18□□□□□ -1.9
VPS33AQ96AX1 AC025518.1-201ENST00000479856 347 ntBASIC3.18□□□□□ -1.9
VPS33AQ96AX1 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS33AQ96AX1 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS33AQ96AX1 ARL4AP2-201ENST00000507378 601 ntBASIC3.18□□□□□ -1.9
VPS33AQ96AX1 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.18□□□□□ -1.9
VPS33AQ96AX1 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.18□□□□□ -1.9
VPS33AQ96AX1 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.18□□□□□ -1.9
VPS33AQ96AX1 RNA5SP217-201ENST00000515959 91 ntBASIC3.18□□□□□ -1.9
VPS33AQ96AX1 AC245166.1-201ENST00000521012 253 ntBASIC3.18□□□□□ -1.9
VPS33AQ96AX1 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VPS33AQ96AX1 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.18□□□□□ -1.9
VPS33AQ96AX1 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.18□□□□□ -1.9
VPS33AQ96AX1 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS33AQ96AX1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.18□□□□□ -1.9
VPS33AQ96AX1 AC012435.1-202ENST00000568772 240 ntBASIC3.18□□□□□ -1.9
VPS33AQ96AX1 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.18□□□□□ -1.9
VPS33AQ96AX1 MIR3160-1-201ENST00000577972 85 ntBASIC3.18□□□□□ -1.9
VPS33AQ96AX1 U73023.1-201ENST00000603134 700 ntBASIC3.18□□□□□ -1.9
VPS33AQ96AX1 BX323046.1-201ENST00000610145 535 ntBASIC3.18□□□□□ -1.9
VPS33AQ96AX1 AL121772.2-201ENST00000614331 297 ntBASIC3.18□□□□□ -1.9
VPS33AQ96AX1 uc_338.12-201ENST00000616344 181 ntBASIC3.18□□□□□ -1.9
VPS33AQ96AX1 AC091304.6-201ENST00000619761 202 ntBASIC3.18□□□□□ -1.9
VPS33AQ96AX1 AC068880.5-201ENST00000624331 290 ntBASIC3.18□□□□□ -1.9
VPS33AQ96AX1 AL136313.1-201ENST00000624804 202 ntBASIC3.18□□□□□ -1.9
VPS33AQ96AX1 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS33AQ96AX1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.18□□□□□ -1.9
VPS33AQ96AX1 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.18□□□□□ -1.9
VPS33AQ96AX1 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 AP003122.5-201ENST00000527668 3766 ntBASIC3.17□□□□□ -1.9
VPS33AQ96AX1 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 RNA5SP124-201ENST00000362739 110 ntBASIC3.17□□□□□ -1.9
VPS33AQ96AX1 RNU6-553P-201ENST00000364047 96 ntBASIC3.17□□□□□ -1.9
VPS33AQ96AX1 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 RN7SKP123-201ENST00000410732 291 ntBASIC3.17□□□□□ -1.9
VPS33AQ96AX1 RNU4-72P-201ENST00000410754 173 ntBASIC3.17□□□□□ -1.9
VPS33AQ96AX1 AC007899.1-201ENST00000412776 775 ntBASIC3.17□□□□□ -1.9
VPS33AQ96AX1 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS33AQ96AX1 ZNF90P2-204ENST00000419323 1075 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms