Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AL159987.2-201ENST00000432754 307 ntBASIC3.78□□□□□ -1.8
HMGB4Q8WW32 AC073063.1-201ENST00000434352 607 ntBASIC3.78□□□□□ -1.8
HMGB4Q8WW32 MTND1P4-201ENST00000435196 415 ntBASIC3.78□□□□□ -1.8
HMGB4Q8WW32 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 AC010493.1-201ENST00000513479 292 ntBASIC3.78□□□□□ -1.8
HMGB4Q8WW32 RNU2-10P-201ENST00000516375 211 ntBASIC3.78□□□□□ -1.8
HMGB4Q8WW32 MTND1P5-201ENST00000517906 940 ntBASIC3.78□□□□□ -1.8
HMGB4Q8WW32 FAM92A1P1-201ENST00000528023 890 ntBASIC3.78□□□□□ -1.8
HMGB4Q8WW32 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 ARL2BPP2-201ENST00000550907 489 ntBASIC3.78□□□□□ -1.8
HMGB4Q8WW32 AC037471.2-201ENST00000564941 598 ntBASIC3.78□□□□□ -1.8
HMGB4Q8WW32 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 AC010591.1-201ENST00000603941 649 ntBASIC3.78□□□□□ -1.8
HMGB4Q8WW32 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 OR5H6-203ENST00000642105 978 ntBASIC3.78□□□□□ -1.8
HMGB4Q8WW32 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 AC032011.1-201ENST00000611703 1549 ntBASIC3.78□□□□□ -1.8
HMGB4Q8WW32 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.78□□□□□ -1.8
HMGB4Q8WW32 MAPK10-372ENST00000641954 3413 ntBASIC3.77□□□□□ -1.81
HMGB4Q8WW32 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HMGB4Q8WW32 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.77□□□□□ -1.81
HMGB4Q8WW32 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
HMGB4Q8WW32 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HMGB4Q8WW32 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.77□□□□□ -1.81
HMGB4Q8WW32 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HMGB4Q8WW32 AC007685.1-201ENST00000329806 452 ntBASIC3.77□□□□□ -1.81
HMGB4Q8WW32 HSPE1P11-201ENST00000339579 310 ntBASIC3.77□□□□□ -1.81
HMGB4Q8WW32 RNU1-39P-201ENST00000383897 165 ntBASIC3.77□□□□□ -1.81
HMGB4Q8WW32 RNU6-39P-201ENST00000384344 107 ntBASIC3.77□□□□□ -1.81
HMGB4Q8WW32 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HMGB4Q8WW32 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HMGB4Q8WW32 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.77□□□□□ -1.81
HMGB4Q8WW32 RNU2-36P-201ENST00000410361 191 ntBASIC3.77□□□□□ -1.81
HMGB4Q8WW32 AC009237.5-201ENST00000414271 501 ntBASIC3.77□□□□□ -1.81
HMGB4Q8WW32 AC073464.1-201ENST00000429823 534 ntBASIC3.77□□□□□ -1.81
HMGB4Q8WW32 C8orf59P1-201ENST00000429930 303 ntBASIC3.77□□□□□ -1.81
HMGB4Q8WW32 USP12PX-201ENST00000432383 1057 ntBASIC3.77□□□□□ -1.81
HMGB4Q8WW32 RPL21P23-201ENST00000446654 460 ntBASIC3.77□□□□□ -1.81
HMGB4Q8WW32 AC133473.1-201ENST00000455173 299 ntBASIC3.77□□□□□ -1.81
HMGB4Q8WW32 RPS27AP1-201ENST00000475545 471 ntBASIC3.77□□□□□ -1.81
HMGB4Q8WW32 HSPE1P6-201ENST00000479457 291 ntBASIC3.77□□□□□ -1.81
HMGB4Q8WW32 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.77□□□□□ -1.81
HMGB4Q8WW32 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.77□□□□□ -1.81
HMGB4Q8WW32 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.77□□□□□ -1.81
HMGB4Q8WW32 AC023194.1-201ENST00000493084 308 ntBASIC3.77□□□□□ -1.81
HMGB4Q8WW32 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.77□□□□□ -1.81
HMGB4Q8WW32 AC025554.1-201ENST00000505641 188 ntBASIC3.77□□□□□ -1.81
HMGB4Q8WW32 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.77□□□□□ -1.81
HMGB4Q8WW32 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.77□□□□□ -1.81
HMGB4Q8WW32 SCARNA24.1-201ENST00000516465 137 ntBASIC3.77□□□□□ -1.81
HMGB4Q8WW32 IGKV2D-23-201ENST00000518179 286 ntBASIC3.77□□□□□ -1.81
HMGB4Q8WW32 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.77□□□□□ -1.81
HMGB4Q8WW32 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.77□□□□□ -1.81
HMGB4Q8WW32 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.77□□□□□ -1.81
HMGB4Q8WW32 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.77□□□□□ -1.81
HMGB4Q8WW32 GLUD1P4-201ENST00000590914 418 ntBASIC3.77□□□□□ -1.81
HMGB4Q8WW32 AC025165.5-201ENST00000602802 578 ntBASIC3.77□□□□□ -1.81
HMGB4Q8WW32 RNU1-30P-201ENST00000606575 163 ntBASIC3.77□□□□□ -1.81
HMGB4Q8WW32 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.77□□□□□ -1.81
HMGB4Q8WW32 AL713922.2-201ENST00000619384 716 ntBASIC3.77□□□□□ -1.81
HMGB4Q8WW32 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
HMGB4Q8WW32 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HMGB4Q8WW32 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.77□□□□□ -1.81
HMGB4Q8WW32 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.77□□□□□ -1.81
HMGB4Q8WW32 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.77□□□□□ -1.81
HMGB4Q8WW32 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.76□□□□□ -1.81
HMGB4Q8WW32 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HMGB4Q8WW32 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.76□□□□□ -1.81
HMGB4Q8WW32 PRO1804-201ENST00000623780 2050 ntBASIC3.76□□□□□ -1.81
HMGB4Q8WW32 DEFB108F-201ENST00000344638 222 ntBASIC3.76□□□□□ -1.81
HMGB4Q8WW32 RNU6-108P-201ENST00000365558 107 ntBASIC3.76□□□□□ -1.81
HMGB4Q8WW32 RNU4-55P-201ENST00000410731 137 ntBASIC3.76□□□□□ -1.81
HMGB4Q8WW32 UBE2V1P10-201ENST00000414685 269 ntBASIC3.76□□□□□ -1.81
HMGB4Q8WW32 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.76□□□□□ -1.81
HMGB4Q8WW32 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.76□□□□□ -1.81
HMGB4Q8WW32 AC091390.3-201ENST00000426478 338 ntBASIC3.76□□□□□ -1.81
HMGB4Q8WW32 GPR143P-201ENST00000434155 205 ntBASIC3.76□□□□□ -1.81
HMGB4Q8WW32 USP9YP28-201ENST00000435142 589 ntBASIC3.76□□□□□ -1.81
HMGB4Q8WW32 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.76□□□□□ -1.81
HMGB4Q8WW32 PSPHP1-201ENST00000450062 261 ntBASIC3.76□□□□□ -1.81
HMGB4Q8WW32 SNRPGP6-201ENST00000451124 220 ntBASIC3.76□□□□□ -1.81
HMGB4Q8WW32 AC023598.1-201ENST00000472521 361 ntBASIC3.76□□□□□ -1.81
HMGB4Q8WW32 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.76□□□□□ -1.81
HMGB4Q8WW32 RPS3AP14-201ENST00000483907 780 ntBASIC3.76□□□□□ -1.81
HMGB4Q8WW32 AC007182.2-201ENST00000489251 402 ntBASIC3.76□□□□□ -1.81
HMGB4Q8WW32 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms