Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AC112693.2-201ENST00000556538 232 ntBASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 AC007566.2-201ENST00000603642 413 ntBASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 SNHG22-203ENST00000617833 660 ntBASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NKX2-3Q8TAU0 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 ADAM24P-201ENST00000398655 2101 ntBASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 OR4G2P-202ENST00000641004 1759 ntBASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 AL109809.4-201ENST00000603520 2185 ntBASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 Y_RNA.261-201ENST00000364631 102 ntBASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 TRAPPC2P4-201ENST00000421750 331 ntBASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 AL591043.1-201ENST00000432461 424 ntBASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 RPL23AP33-201ENST00000442301 452 ntBASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 AL354710.1-201ENST00000453641 246 ntBASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 Y_RNA.638-201ENST00000459374 113 ntBASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 AC104057.1-201ENST00000515547 497 ntBASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 snoU109.6-201ENST00000516831 118 ntBASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 AC027369.5-201ENST00000533838 755 ntBASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 AC024940.3-201ENST00000538551 316 ntBASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 AC074140.1-201ENST00000621617 208 ntBASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 AC092747.4-201ENST00000620519 1861 ntBASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
NKX2-3Q8TAU0 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 AC097063.1-201ENST00000426714 1797 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 HSP90AA4P-202ENST00000506915 2228 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 Y_RNA.82-201ENST00000363000 102 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 Y_RNA.92-201ENST00000363043 102 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 Y_RNA.235-201ENST00000364412 102 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 Y_RNA.306-201ENST00000365015 102 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 Y_RNA.312-201ENST00000365089 102 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 Y_RNA.322-201ENST00000365151 102 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 RNU6-449P-201ENST00000383914 107 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 RNU6-933P-201ENST00000384424 107 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 RNU6-102P-201ENST00000384485 104 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 MIR105-1-201ENST00000385222 81 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 MIR589-201ENST00000385238 99 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 AL513475.1-201ENST00000406602 315 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 Y_RNA.590-201ENST00000410140 107 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 RNU2-61P-201ENST00000411069 191 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 DPPA2P2-201ENST00000418220 897 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 AC016712.1-201ENST00000431088 378 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 HSPE1P25-201ENST00000455484 251 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 Y_RNA.650-201ENST00000459002 102 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 COX7A2P2-201ENST00000505291 250 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 AC113155.1-201ENST00000511141 769 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 Y_RNA.777-201ENST00000516982 102 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 Y_RNA.771-201ENST00000598668 102 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 AC006077.1-201ENST00000604746 343 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 Y_RNA.789-201ENST00000622480 102 ntBASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
NKX2-3Q8TAU0 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC6.17□□□□□ -1.42
NKX2-3Q8TAU0 Y_RNA.127-201ENST00000363386 109 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms