Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
VPS8Q8N3P4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
VPS8Q8N3P4 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.09□□□□□ -2.08
VPS8Q8N3P4 HNRNPDP2-201ENST00000406475 478 ntBASIC2.08□□□□□ -2.08
VPS8Q8N3P4 AL590084.1-201ENST00000407885 387 ntBASIC2.08□□□□□ -2.08
VPS8Q8N3P4 U3.40-201ENST00000408706 208 ntBASIC2.08□□□□□ -2.08
VPS8Q8N3P4 MIR1276-201ENST00000408707 83 ntBASIC2.08□□□□□ -2.08
VPS8Q8N3P4 SNRPGP13-201ENST00000442212 177 ntBASIC2.08□□□□□ -2.08
VPS8Q8N3P4 AP002371.1-201ENST00000463604 433 ntBASIC2.08□□□□□ -2.08
VPS8Q8N3P4 AC022493.1-201ENST00000492984 337 ntBASIC2.08□□□□□ -2.08
VPS8Q8N3P4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
VPS8Q8N3P4 AP003033.1-201ENST00000527244 415 ntBASIC2.08□□□□□ -2.08
VPS8Q8N3P4 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.08□□□□□ -2.08
VPS8Q8N3P4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.08□□□□□ -2.08
VPS8Q8N3P4 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.08□□□□□ -2.08
VPS8Q8N3P4 Y_RNA.327-201ENST00000365201 102 ntBASIC2.08□□□□□ -2.08
VPS8Q8N3P4 RNU6-532P-201ENST00000384318 107 ntBASIC2.08□□□□□ -2.08
VPS8Q8N3P4 AP002345.1-201ENST00000456493 928 ntBASIC2.08□□□□□ -2.08
VPS8Q8N3P4 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.08□□□□□ -2.08
VPS8Q8N3P4 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.08□□□□□ -2.08
VPS8Q8N3P4 AC132942.1-201ENST00000486753 483 ntBASIC2.08□□□□□ -2.08
VPS8Q8N3P4 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VPS8Q8N3P4 RN7SKP96-201ENST00000516948 297 ntBASIC2.08□□□□□ -2.08
VPS8Q8N3P4 AC025423.2-201ENST00000537570 439 ntBASIC2.08□□□□□ -2.08
VPS8Q8N3P4 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.08□□□□□ -2.08
VPS8Q8N3P4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.08□□□□□ -2.08
VPS8Q8N3P4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.08□□□□□ -2.08
VPS8Q8N3P4 U73023.1-201ENST00000603134 700 ntBASIC2.08□□□□□ -2.08
VPS8Q8N3P4 MIR6076-201ENST00000617521 113 ntBASIC2.08□□□□□ -2.08
VPS8Q8N3P4 FAM157B-203ENST00000639350 358 ntBASIC2.08□□□□□ -2.08
VPS8Q8N3P4 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
VPS8Q8N3P4 RNA5SP391-201ENST00000363456 119 ntBASIC2.07□□□□□ -2.08
VPS8Q8N3P4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.07□□□□□ -2.08
VPS8Q8N3P4 RPS15AP40-201ENST00000419621 391 ntBASIC2.07□□□□□ -2.08
VPS8Q8N3P4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.07□□□□□ -2.08
VPS8Q8N3P4 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.07□□□□□ -2.08
VPS8Q8N3P4 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.07□□□□□ -2.08
VPS8Q8N3P4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.07□□□□□ -2.08
VPS8Q8N3P4 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
VPS8Q8N3P4 AC114322.1-201ENST00000506771 926 ntBASIC2.07□□□□□ -2.08
VPS8Q8N3P4 OR10V3P-201ENST00000525712 725 ntBASIC2.07□□□□□ -2.08
VPS8Q8N3P4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.07□□□□□ -2.08
VPS8Q8N3P4 AP001542.2-201ENST00000593141 364 ntBASIC2.07□□□□□ -2.08
VPS8Q8N3P4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.06□□□□□ -2.08
VPS8Q8N3P4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
VPS8Q8N3P4 MIR337-201ENST00000362281 93 ntBASIC2.06□□□□□ -2.08
VPS8Q8N3P4 RNU6-629P-201ENST00000384061 103 ntBASIC2.06□□□□□ -2.08
VPS8Q8N3P4 MIR499A-201ENST00000384903 122 ntBASIC2.06□□□□□ -2.08
VPS8Q8N3P4 RPL7P27-201ENST00000403775 720 ntBASIC2.06□□□□□ -2.08
VPS8Q8N3P4 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
VPS8Q8N3P4 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.06□□□□□ -2.08
VPS8Q8N3P4 RPS24P6-201ENST00000452670 400 ntBASIC2.06□□□□□ -2.08
VPS8Q8N3P4 MTCYBP35-201ENST00000503630 1137 ntBASIC2.06□□□□□ -2.08
VPS8Q8N3P4 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.06□□□□□ -2.08
VPS8Q8N3P4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.06□□□□□ -2.08
VPS8Q8N3P4 AC090897.2-201ENST00000581715 130 ntBASIC2.06□□□□□ -2.08
VPS8Q8N3P4 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.06□□□□□ -2.08
VPS8Q8N3P4 AC098848.2-201ENST00000588023 330 ntBASIC2.06□□□□□ -2.08
VPS8Q8N3P4 AC015726.3-201ENST00000624501 418 ntBASIC2.06□□□□□ -2.08
VPS8Q8N3P4 AL354685.2-201ENST00000448218 1447 ntBASIC2.06□□□□□ -2.08
VPS8Q8N3P4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.06□□□□□ -2.08
VPS8Q8N3P4 CENPCP1-201ENST00000533085 2578 ntBASIC2.05□□□□□ -2.08
VPS8Q8N3P4 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
VPS8Q8N3P4 RNU6-203P-201ENST00000384038 104 ntBASIC2.05□□□□□ -2.08
VPS8Q8N3P4 RNU4-72P-201ENST00000410754 173 ntBASIC2.05□□□□□ -2.08
VPS8Q8N3P4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.05□□□□□ -2.08
VPS8Q8N3P4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
VPS8Q8N3P4 RPL31P20-201ENST00000449593 360 ntBASIC2.05□□□□□ -2.08
VPS8Q8N3P4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.05□□□□□ -2.08
VPS8Q8N3P4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.05□□□□□ -2.08
VPS8Q8N3P4 AC023790.1-201ENST00000482174 347 ntBASIC2.05□□□□□ -2.08
VPS8Q8N3P4 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
VPS8Q8N3P4 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.05□□□□□ -2.08
VPS8Q8N3P4 AC004062.1-201ENST00000509926 645 ntBASIC2.05□□□□□ -2.08
VPS8Q8N3P4 RN7SKP31-201ENST00000516354 278 ntBASIC2.05□□□□□ -2.08
VPS8Q8N3P4 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.05□□□□□ -2.08
VPS8Q8N3P4 WISP1-OT1-201ENST00000602893 642 ntBASIC2.05□□□□□ -2.08
VPS8Q8N3P4 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.05□□□□□ -2.08
VPS8Q8N3P4 AL353770.2-201ENST00000620024 78 ntBASIC2.05□□□□□ -2.08
VPS8Q8N3P4 AL031601.2-202ENST00000622650 282 ntBASIC2.05□□□□□ -2.08
VPS8Q8N3P4 AC006963.1-201ENST00000624003 1052 ntBASIC2.05□□□□□ -2.08
VPS8Q8N3P4 ZNF519P1-201ENST00000449011 1626 ntBASIC2.04□□□□□ -2.08
VPS8Q8N3P4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VPS8Q8N3P4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.04□□□□□ -2.08
VPS8Q8N3P4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.04□□□□□ -2.08
VPS8Q8N3P4 RPS3AP44-201ENST00000425466 790 ntBASIC2.04□□□□□ -2.08
VPS8Q8N3P4 VN1R108P-201ENST00000431580 830 ntBASIC2.04□□□□□ -2.08
VPS8Q8N3P4 UBE2V1P13-201ENST00000436983 439 ntBASIC2.04□□□□□ -2.08
VPS8Q8N3P4 TAF9P1-201ENST00000445421 515 ntBASIC2.04□□□□□ -2.08
VPS8Q8N3P4 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.04□□□□□ -2.08
VPS8Q8N3P4 TAF9P2-201ENST00000454958 515 ntBASIC2.04□□□□□ -2.08
VPS8Q8N3P4 SNRPFP4-201ENST00000456366 242 ntBASIC2.04□□□□□ -2.08
VPS8Q8N3P4 AC092798.1-201ENST00000458542 409 ntBASIC2.04□□□□□ -2.08
VPS8Q8N3P4 RPL5P13-201ENST00000462840 709 ntBASIC2.04□□□□□ -2.08
VPS8Q8N3P4 RPL30P14-201ENST00000482744 348 ntBASIC2.04□□□□□ -2.08
VPS8Q8N3P4 SNORA31.23-201ENST00000517219 133 ntBASIC2.04□□□□□ -2.08
VPS8Q8N3P4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.04□□□□□ -2.08
VPS8Q8N3P4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.04□□□□□ -2.08
VPS8Q8N3P4 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.04□□□□□ -2.08
VPS8Q8N3P4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms