Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 ERHP2-201ENST00000402323 299 ntBASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 RPS4XP7-201ENST00000406274 780 ntBASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 VN1R51P-201ENST00000411675 945 ntBASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 MTATP6P27-201ENST00000416987 621 ntBASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 AL356320.2-201ENST00000417263 507 ntBASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 NUP35P1-201ENST00000422734 947 ntBASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 AC024082.2-201ENST00000434771 238 ntBASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 RPL26P6-201ENST00000440913 438 ntBASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 OR10R1P-201ENST00000441524 1141 ntBASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 RNU7-136P-201ENST00000458819 69 ntBASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 AC135721.1-201ENST00000497954 479 ntBASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 TBCAP3-201ENST00000512475 312 ntBASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 AC060766.3-201ENST00000591442 263 ntBASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 BNIP3P27-201ENST00000599991 412 ntBASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 MTND3P19-201ENST00000603825 345 ntBASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 DUXAP11-201ENST00000603858 526 ntBASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 AL031176.1-201ENST00000604554 466 ntBASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 AL121652.1-201ENST00000608851 448 ntBASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 AL359693.1-201ENST00000614959 2407 ntBASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
CCDC65Q8IXS2 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 FRG1BP-201ENST00000278882 761 ntBASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 RNA5SP456-201ENST00000364002 114 ntBASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 RNU6-560P-201ENST00000364007 108 ntBASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 RNU6-173P-201ENST00000364215 104 ntBASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 DEFA7P-201ENST00000382676 285 ntBASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 RNU6-952P-201ENST00000391164 108 ntBASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 NDUFB4P4-201ENST00000404822 243 ntBASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 RNU4-22P-201ENST00000411058 166 ntBASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 USP9YP11-201ENST00000427537 717 ntBASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 RPS12P2-201ENST00000439728 269 ntBASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 ZNF886P-201ENST00000450781 723 ntBASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 FCF1P6-201ENST00000456841 595 ntBASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 RPL31P50-201ENST00000471002 296 ntBASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 RN7SL432P-201ENST00000484057 298 ntBASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 XKRY-201ENST00000510392 1100 ntBASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 RNA5SP82-201ENST00000516707 92 ntBASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 BNIP3P26-201ENST00000600827 554 ntBASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 AC091057.3-201ENST00000602684 733 ntBASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 AC013444.2-201ENST00000603317 787 ntBASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 AC034102.8-201ENST00000615146 484 ntBASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC65Q8IXS2 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 SNORA25.6-201ENST00000364121 118 ntBASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 RNU6-621P-201ENST00000364752 109 ntBASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 RNU2-43P-201ENST00000410306 190 ntBASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 RPL7P37-201ENST00000425095 738 ntBASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 AC108938.1-201ENST00000451204 136 ntBASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 AL109933.2-201ENST00000452651 260 ntBASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 RBM43P1-201ENST00000476891 1081 ntBASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 AC004924.1-201ENST00000480160 781 ntBASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 AC021146.8-201ENST00000507455 733 ntBASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 RN7SKP24-201ENST00000515888 284 ntBASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 SNORA31.22-201ENST00000517204 135 ntBASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 HMGB1P41-201ENST00000520234 440 ntBASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 OR5BN1P-201ENST00000532955 829 ntBASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC65Q8IXS2 ACTR3BP3-201ENST00000565577 979 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms