Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC007792.1-201ENST00000623023 402 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 AC116667.1-201ENST00000604855 2072 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VRK3Q8IV63 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.05□□□□□ -1.76
VRK3Q8IV63 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
VRK3Q8IV63 MTND5P28-201ENST00000438005 1594 ntBASIC4.05□□□□□ -1.76
VRK3Q8IV63 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
VRK3Q8IV63 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
VRK3Q8IV63 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.04□□□□□ -1.76
VRK3Q8IV63 AC010329.2-201ENST00000595195 2737 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VRK3Q8IV63 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.04□□□□□ -1.76
VRK3Q8IV63 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
VRK3Q8IV63 RNA5SP52-201ENST00000362448 134 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 RNU6-97P-201ENST00000363387 104 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 RNU6-511P-201ENST00000363496 107 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 Y_RNA.212-201ENST00000364177 102 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.04□□□□□ -1.76
VRK3Q8IV63 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.04□□□□□ -1.76
VRK3Q8IV63 MIR19A-201ENST00000384878 82 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 RNU11-4P-201ENST00000391149 133 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 AL606923.1-201ENST00000406616 190 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 Y_RNA.605-201ENST00000410577 105 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 EZH2P1-201ENST00000431167 291 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 UBE2V1P13-201ENST00000436983 439 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.04□□□□□ -1.76
VRK3Q8IV63 PRPS1P1-201ENST00000445305 876 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.04□□□□□ -1.76
VRK3Q8IV63 AL118520.1-201ENST00000450770 291 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 MTND1P9-201ENST00000453775 944 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.04□□□□□ -1.76
VRK3Q8IV63 AC006517.1-201ENST00000480485 328 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 AC020893.1-201ENST00000502452 580 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 AC025554.1-201ENST00000505641 188 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 AC017037.1-201ENST00000508460 471 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 AC006499.6-201ENST00000511169 607 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.04□□□□□ -1.76
VRK3Q8IV63 RNU6-123P-201ENST00000516163 102 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 RNU6-1088P-201ENST00000516850 104 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 RNU6-1137P-201ENST00000517073 99 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 AC090281.1-201ENST00000523019 276 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 COX6CP5-201ENST00000527162 228 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 AC011979.2-201ENST00000527568 352 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.04□□□□□ -1.76
VRK3Q8IV63 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.04□□□□□ -1.76
VRK3Q8IV63 AL117187.1-201ENST00000555482 181 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 AL118558.2-201ENST00000556294 238 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 AC004817.2-201ENST00000561794 651 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 RPL23AP87-202ENST00000573039 466 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 MIR3942-201ENST00000585264 109 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.04□□□□□ -1.76
VRK3Q8IV63 BNIP3P25-201ENST00000596023 559 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 7SK.7-201ENST00000603504 247 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 AC007938.3-201ENST00000604965 623 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 MIR7702-201ENST00000621931 59 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 AC244517.12-201ENST00000623581 663 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 AC008785.1-201ENST00000624475 456 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VRK3Q8IV63 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
VRK3Q8IV63 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VRK3Q8IV63 AP001350.1-201ENST00000601906 1524 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
VRK3Q8IV63 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.04□□□□□ -1.76
VRK3Q8IV63 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VRK3Q8IV63 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VRK3Q8IV63 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.04□□□□□ -1.76
VRK3Q8IV63 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
VRK3Q8IV63 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
VRK3Q8IV63 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.03□□□□□ -1.76
VRK3Q8IV63 MTND4P14-201ENST00000435799 1354 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 ELL2P4-201ENST00000446870 1376 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 TAB3P1-202ENST00000452645 1634 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.03□□□□□ -1.76
VRK3Q8IV63 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VRK3Q8IV63 Z82217.1-201ENST00000625157 8149 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
VRK3Q8IV63 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
VRK3Q8IV63 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VRK3Q8IV63 AC068254.2-201ENST00000623938 3577 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 RNA5SP388-201ENST00000362584 119 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VRK3Q8IV63 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.03□□□□□ -1.76
VRK3Q8IV63 Y_RNA.452-201ENST00000384202 108 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 RNU6-1226P-201ENST00000384317 107 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 MIR548F5-201ENST00000408421 86 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 MIR548F4-201ENST00000408515 105 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 AC074085.1-201ENST00000413598 418 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 AC009302.1-201ENST00000417147 390 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 PSMA6P3-201ENST00000428242 164 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.03□□□□□ -1.76
VRK3Q8IV63 AL358472.1-201ENST00000431295 329 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.03□□□□□ -1.76
VRK3Q8IV63 FTH1P1-201ENST00000437933 532 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.03□□□□□ -1.76
VRK3Q8IV63 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.03□□□□□ -1.76
VRK3Q8IV63 ELOCP24-201ENST00000456370 334 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 RPS29P15-201ENST00000458329 171 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 RNU6-1208P-201ENST00000459588 107 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 RN7SL585P-201ENST00000470538 280 ntBASIC4.03□□□□□ -1.76
VRK3Q8IV63 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms