Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SNORD27-201ENST00000363981 72 ntBASIC5.63□□□□□ -1.51
RNF135Q8IUD6 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.63□□□□□ -1.51
RNF135Q8IUD6 RNU6-338P-201ENST00000383888 105 ntBASIC5.63□□□□□ -1.51
RNF135Q8IUD6 Y_RNA.416-201ENST00000384014 113 ntBASIC5.63□□□□□ -1.51
RNF135Q8IUD6 Y_RNA.464-201ENST00000384282 110 ntBASIC5.63□□□□□ -1.51
RNF135Q8IUD6 RNU6-933P-201ENST00000384424 107 ntBASIC5.63□□□□□ -1.51
RNF135Q8IUD6 SNORA51.11-201ENST00000384442 131 ntBASIC5.63□□□□□ -1.51
RNF135Q8IUD6 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RNF135Q8IUD6 PCNPP3-201ENST00000393579 471 ntBASIC5.63□□□□□ -1.51
RNF135Q8IUD6 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF135Q8IUD6 AC006946.1-201ENST00000429106 328 ntBASIC5.63□□□□□ -1.51
RNF135Q8IUD6 GSTM5P1-201ENST00000434751 660 ntBASIC5.63□□□□□ -1.51
RNF135Q8IUD6 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF135Q8IUD6 RPS3AP46-201ENST00000448352 682 ntBASIC5.63□□□□□ -1.51
RNF135Q8IUD6 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF135Q8IUD6 AC008716.1-201ENST00000511084 513 ntBASIC5.63□□□□□ -1.51
RNF135Q8IUD6 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF135Q8IUD6 AC024940.3-201ENST00000538551 316 ntBASIC5.63□□□□□ -1.51
RNF135Q8IUD6 MIR4270-201ENST00000581799 70 ntBASIC5.63□□□□□ -1.51
RNF135Q8IUD6 AC006272.2-201ENST00000594725 163 ntBASIC5.63□□□□□ -1.51
RNF135Q8IUD6 AC008814.1-201ENST00000603797 406 ntBASIC5.63□□□□□ -1.51
RNF135Q8IUD6 AC127459.3-201ENST00000624328 466 ntBASIC5.63□□□□□ -1.51
RNF135Q8IUD6 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RNF135Q8IUD6 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF135Q8IUD6 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.63□□□□□ -1.51
RNF135Q8IUD6 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RNF135Q8IUD6 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RNF135Q8IUD6 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNF135Q8IUD6 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNF135Q8IUD6 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNF135Q8IUD6 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNF135Q8IUD6 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RNF135Q8IUD6 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RNF135Q8IUD6 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.62□□□□□ -1.51
RNF135Q8IUD6 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNF135Q8IUD6 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNF135Q8IUD6 RN7SKP224-201ENST00000364140 325 ntBASIC5.62□□□□□ -1.51
RNF135Q8IUD6 RNU4-50P-201ENST00000364361 141 ntBASIC5.62□□□□□ -1.51
RNF135Q8IUD6 Y_RNA.274-201ENST00000364714 101 ntBASIC5.62□□□□□ -1.51
RNF135Q8IUD6 Y_RNA.324-201ENST00000365165 102 ntBASIC5.62□□□□□ -1.51
RNF135Q8IUD6 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RNF135Q8IUD6 SAR1AP2-201ENST00000392696 594 ntBASIC5.62□□□□□ -1.51
RNF135Q8IUD6 RNU2-14P-201ENST00000411053 191 ntBASIC5.62□□□□□ -1.51
RNF135Q8IUD6 RNU2-71P-201ENST00000411395 189 ntBASIC5.62□□□□□ -1.51
RNF135Q8IUD6 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.62□□□□□ -1.51
RNF135Q8IUD6 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.62□□□□□ -1.51
RNF135Q8IUD6 FCF1P4-201ENST00000448326 183 ntBASIC5.62□□□□□ -1.51
RNF135Q8IUD6 IFNWP4-201ENST00000453148 294 ntBASIC5.62□□□□□ -1.51
RNF135Q8IUD6 RNU7-169P-201ENST00000459456 61 ntBASIC5.62□□□□□ -1.51
RNF135Q8IUD6 RPS15AP34-201ENST00000487776 387 ntBASIC5.62□□□□□ -1.51
RNF135Q8IUD6 RNU6-570P-201ENST00000517051 105 ntBASIC5.62□□□□□ -1.51
RNF135Q8IUD6 AC144568.1-201ENST00000520139 137 ntBASIC5.62□□□□□ -1.51
RNF135Q8IUD6 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.62□□□□□ -1.51
RNF135Q8IUD6 TRAV32-201ENST00000553993 340 ntBASIC5.62□□□□□ -1.51
RNF135Q8IUD6 FP236240.3-201ENST00000623061 327 ntBASIC5.62□□□□□ -1.51
RNF135Q8IUD6 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNF135Q8IUD6 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.62□□□□□ -1.51
RNF135Q8IUD6 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNF135Q8IUD6 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNF135Q8IUD6 AL049555.1-201ENST00000562834 1933 ntBASIC5.62□□□□□ -1.51
RNF135Q8IUD6 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.62□□□□□ -1.51
RNF135Q8IUD6 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RNF135Q8IUD6 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.61□□□□□ -1.51
RNF135Q8IUD6 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF135Q8IUD6 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
RNF135Q8IUD6 SNURFL-201ENST00000309296 343 ntBASIC5.61□□□□□ -1.51
RNF135Q8IUD6 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF135Q8IUD6 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RNF135Q8IUD6 Y_RNA.19-201ENST00000362462 99 ntBASIC5.61□□□□□ -1.51
RNF135Q8IUD6 RN7SKP185-201ENST00000362813 326 ntBASIC5.61□□□□□ -1.51
RNF135Q8IUD6 RN7SKP95-201ENST00000362860 303 ntBASIC5.61□□□□□ -1.51
RNF135Q8IUD6 Y_RNA.297-201ENST00000364950 91 ntBASIC5.61□□□□□ -1.51
RNF135Q8IUD6 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
RNF135Q8IUD6 RNU6-125P-201ENST00000384505 107 ntBASIC5.61□□□□□ -1.51
RNF135Q8IUD6 Y_RNA.539-201ENST00000384635 107 ntBASIC5.61□□□□□ -1.51
RNF135Q8IUD6 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.61□□□□□ -1.51
RNF135Q8IUD6 AL451062.2-201ENST00000427515 271 ntBASIC5.61□□□□□ -1.51
RNF135Q8IUD6 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.61□□□□□ -1.51
RNF135Q8IUD6 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.61□□□□□ -1.51
RNF135Q8IUD6 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.61□□□□□ -1.51
RNF135Q8IUD6 AC013470.1-201ENST00000453438 462 ntBASIC5.61□□□□□ -1.51
RNF135Q8IUD6 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.61□□□□□ -1.51
RNF135Q8IUD6 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
RNF135Q8IUD6 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.61□□□□□ -1.51
RNF135Q8IUD6 OR7H2P-201ENST00000513483 306 ntBASIC5.61□□□□□ -1.51
RNF135Q8IUD6 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.61□□□□□ -1.51
RNF135Q8IUD6 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
RNF135Q8IUD6 AL110118.1-201ENST00000553543 400 ntBASIC5.61□□□□□ -1.51
RNF135Q8IUD6 PARP1P2-201ENST00000556806 195 ntBASIC5.61□□□□□ -1.51
RNF135Q8IUD6 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNF135Q8IUD6 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.61□□□□□ -1.51
RNF135Q8IUD6 AC090517.1-201ENST00000569307 266 ntBASIC5.61□□□□□ -1.51
RNF135Q8IUD6 AC006023.2-201ENST00000609916 167 ntBASIC5.61□□□□□ -1.51
RNF135Q8IUD6 AC034102.8-201ENST00000615146 484 ntBASIC5.61□□□□□ -1.51
RNF135Q8IUD6 MIR7703-201ENST00000620784 77 ntBASIC5.61□□□□□ -1.51
RNF135Q8IUD6 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF135Q8IUD6 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.61□□□□□ -1.51
RNF135Q8IUD6 MFSD8-216ENST00000641147 4009 ntBASIC5.61□□□□□ -1.51
RNF135Q8IUD6 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.61□□□□□ -1.51
RNF135Q8IUD6 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 209.6 ms