Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 AC110801.1-201ENST00000623590 212 ntBASIC5.25□□□□□ -1.57
USP48Q86UV5 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
USP48Q86UV5 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.25□□□□□ -1.57
USP48Q86UV5 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.25□□□□□ -1.57
USP48Q86UV5 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP48Q86UV5 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP48Q86UV5 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.24□□□□□ -1.57
USP48Q86UV5 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
USP48Q86UV5 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP48Q86UV5 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
USP48Q86UV5 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP48Q86UV5 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
USP48Q86UV5 AC074029.4-201ENST00000624796 1859 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP48Q86UV5 AL137003.2-201ENST00000606924 2538 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
USP48Q86UV5 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
USP48Q86UV5 SNORA23-201ENST00000365128 182 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 RNU4-66P-201ENST00000365199 138 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 RNU6-61P-201ENST00000365528 109 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 RNU4-20P-201ENST00000365601 151 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
USP48Q86UV5 SNORD3H-201ENST00000384486 214 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.24□□□□□ -1.57
USP48Q86UV5 RPL21P65-201ENST00000406094 466 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 RNU6-387P-201ENST00000411331 105 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 AC114491.1-201ENST00000416095 246 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 EIF4EP1-201ENST00000422311 642 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 AC018630.2-202ENST00000422992 927 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 AC090774.1-201ENST00000435925 246 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.24□□□□□ -1.57
USP48Q86UV5 SNRPFP3-201ENST00000457792 225 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 AL162395.1-201ENST00000457882 422 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 RPL23AP2-201ENST00000471227 466 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 RPL21P99-201ENST00000480369 423 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 MTND5P5-201ENST00000503764 376 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 RNU6-1314P-201ENST00000517139 104 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.24□□□□□ -1.57
USP48Q86UV5 AC093012.1-202ENST00000549403 582 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 AC008739.3-201ENST00000603262 127 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 AL161729.3-201ENST00000603533 673 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 AC079587.1-201ENST00000603846 277 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 AC069200.1-201ENST00000609511 323 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
USP48Q86UV5 AC090574.1-201ENST00000623186 233 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.24□□□□□ -1.57
USP48Q86UV5 MTND4P14-201ENST00000435799 1354 ntBASIC5.24□□□□□ -1.57
USP48Q86UV5 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP48Q86UV5 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.24□□□□□ -1.57
USP48Q86UV5 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.24□□□□□ -1.57
USP48Q86UV5 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
USP48Q86UV5 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.23□□□□□ -1.57
USP48Q86UV5 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.23□□□□□ -1.57
USP48Q86UV5 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.23□□□□□ -1.57
USP48Q86UV5 AL356489.2-201ENST00000566968 3528 ntBASIC5.23□□□□□ -1.57
USP48Q86UV5 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP48Q86UV5 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.23□□□□□ -1.57
USP48Q86UV5 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.23□□□□□ -1.57
USP48Q86UV5 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP48Q86UV5 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.23□□□□□ -1.57
USP48Q86UV5 XIAPP3-201ENST00000312918 795 ntBASIC5.23□□□□□ -1.57
USP48Q86UV5 RNA5SP52-201ENST00000362448 134 ntBASIC5.23□□□□□ -1.57
USP48Q86UV5 Y_RNA.326-201ENST00000365176 113 ntBASIC5.23□□□□□ -1.57
USP48Q86UV5 SNORA32.2-201ENST00000384049 122 ntBASIC5.23□□□□□ -1.57
USP48Q86UV5 Y_RNA.460-201ENST00000384255 102 ntBASIC5.23□□□□□ -1.57
USP48Q86UV5 RNU1-44P-201ENST00000384453 163 ntBASIC5.23□□□□□ -1.57
USP48Q86UV5 AL583835.1-201ENST00000399570 407 ntBASIC5.23□□□□□ -1.57
USP48Q86UV5 RNU4-26P-201ENST00000410270 107 ntBASIC5.23□□□□□ -1.57
USP48Q86UV5 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.23□□□□□ -1.57
USP48Q86UV5 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.23□□□□□ -1.57
USP48Q86UV5 YME1L1P1-201ENST00000429435 297 ntBASIC5.23□□□□□ -1.57
USP48Q86UV5 AC018644.1-201ENST00000429934 551 ntBASIC5.23□□□□□ -1.57
USP48Q86UV5 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.23□□□□□ -1.57
USP48Q86UV5 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.23□□□□□ -1.57
USP48Q86UV5 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.23□□□□□ -1.57
USP48Q86UV5 GAPDHP27-201ENST00000447427 1020 ntBASIC5.23□□□□□ -1.57
USP48Q86UV5 AL118520.1-201ENST00000450770 291 ntBASIC5.23□□□□□ -1.57
USP48Q86UV5 AC007547.1-201ENST00000462177 490 ntBASIC5.23□□□□□ -1.57
USP48Q86UV5 RPL23AP55-201ENST00000498163 452 ntBASIC5.23□□□□□ -1.57
USP48Q86UV5 PPBPP1-201ENST00000510807 373 ntBASIC5.23□□□□□ -1.57
USP48Q86UV5 AC006499.6-201ENST00000511169 607 ntBASIC5.23□□□□□ -1.57
USP48Q86UV5 BTF3P12-201ENST00000519620 469 ntBASIC5.23□□□□□ -1.57
USP48Q86UV5 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.23□□□□□ -1.57
USP48Q86UV5 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC5.23□□□□□ -1.57
USP48Q86UV5 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.23□□□□□ -1.57
USP48Q86UV5 SNORD84-203ENST00000584275 78 ntBASIC5.23□□□□□ -1.57
USP48Q86UV5 AL161756.2-201ENST00000604597 246 ntBASIC5.23□□□□□ -1.57
USP48Q86UV5 uc_338.5-201ENST00000611839 155 ntBASIC5.23□□□□□ -1.57
USP48Q86UV5 AL138721.1-201ENST00000616756 179 ntBASIC5.23□□□□□ -1.57
USP48Q86UV5 API5P2-201ENST00000397055 1498 ntBASIC5.23□□□□□ -1.57
USP48Q86UV5 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.23□□□□□ -1.57
USP48Q86UV5 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.23□□□□□ -1.57
USP48Q86UV5 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.23□□□□□ -1.57
USP48Q86UV5 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP48Q86UV5 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
USP48Q86UV5 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.23□□□□□ -1.57
USP48Q86UV5 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
USP48Q86UV5 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.23□□□□□ -1.57
USP48Q86UV5 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms