Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHFQ7M4L6 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
SHFQ7M4L6 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHFQ7M4L6 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHFQ7M4L6 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SHFQ7M4L6 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SHFQ7M4L6 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHFQ7M4L6 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.37□□□□□ -1.87
SHFQ7M4L6 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHFQ7M4L6 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHFQ7M4L6 RNU6-1090P-201ENST00000364065 94 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 SNORA7.2-201ENST00000364446 145 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 Y_RNA.256-201ENST00000364594 104 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.37□□□□□ -1.87
SHFQ7M4L6 MIR558-201ENST00000384920 94 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SHFQ7M4L6 AL136372.1-201ENST00000403060 228 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 AL359634.1-202ENST00000404721 284 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SHFQ7M4L6 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.37□□□□□ -1.87
SHFQ7M4L6 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.37□□□□□ -1.87
SHFQ7M4L6 OR2AS1P-201ENST00000427827 319 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.37□□□□□ -1.87
SHFQ7M4L6 AL596276.1-201ENST00000434465 418 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 AL138799.3-201ENST00000438968 350 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 RBMX2P4-201ENST00000441256 376 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 MTATP6P30-201ENST00000443540 664 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.37□□□□□ -1.87
SHFQ7M4L6 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.37□□□□□ -1.87
SHFQ7M4L6 HMGN2P7-201ENST00000456186 273 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 RPS23P7-201ENST00000466210 444 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SHFQ7M4L6 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
SHFQ7M4L6 AC010631.1-201ENST00000474150 156 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 RNU2-10P-201ENST00000516375 211 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 RNU7-51P-201ENST00000516560 62 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 Y_RNA.693-201ENST00000516641 110 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 Y_RNA.704-201ENST00000516851 102 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SHFQ7M4L6 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.37□□□□□ -1.87
SHFQ7M4L6 AL359212.1-201ENST00000556608 614 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.37□□□□□ -1.87
SHFQ7M4L6 MIR4738-201ENST00000579134 87 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 KLKP1-201ENST00000595979 403 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 AC012443.1-201ENST00000605605 231 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 AL121992.2-201ENST00000606262 256 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 AP002360.4-201ENST00000606980 481 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 AP001330.5-201ENST00000607176 411 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 AP001596.2-201ENST00000608410 312 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.37□□□□□ -1.87
SHFQ7M4L6 AC023043.4-201ENST00000612081 449 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 SNHG22-203ENST00000617833 660 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 AC244100.1-202ENST00000621554 382 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 AL360181.4-201ENST00000621752 134 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 MIR3688-2-201ENST00000636963 87 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 AP001350.1-201ENST00000601906 1524 ntBASIC3.37□□□□□ -1.87
SHFQ7M4L6 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.37□□□□□ -1.87
SHFQ7M4L6 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHFQ7M4L6 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.37□□□□□ -1.87
SHFQ7M4L6 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHFQ7M4L6 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
SHFQ7M4L6 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHFQ7M4L6 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHFQ7M4L6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SHFQ7M4L6 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHFQ7M4L6 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHFQ7M4L6 RNU6-1085P-201ENST00000363576 107 ntBASIC3.36□□□□□ -1.87
SHFQ7M4L6 RNU6-1284P-201ENST00000363701 100 ntBASIC3.36□□□□□ -1.87
SHFQ7M4L6 RNU5E-6P-201ENST00000365574 115 ntBASIC3.36□□□□□ -1.87
SHFQ7M4L6 Y_RNA.381-201ENST00000365666 102 ntBASIC3.36□□□□□ -1.87
SHFQ7M4L6 AC110754.1-201ENST00000399740 601 ntBASIC3.36□□□□□ -1.87
SHFQ7M4L6 AL022722.2-201ENST00000402519 180 ntBASIC3.36□□□□□ -1.87
SHFQ7M4L6 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.36□□□□□ -1.87
SHFQ7M4L6 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.36□□□□□ -1.87
SHFQ7M4L6 AL356095.1-201ENST00000417217 199 ntBASIC3.36□□□□□ -1.87
SHFQ7M4L6 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.36□□□□□ -1.87
SHFQ7M4L6 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.36□□□□□ -1.87
SHFQ7M4L6 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.36□□□□□ -1.87
SHFQ7M4L6 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.36□□□□□ -1.87
SHFQ7M4L6 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.36□□□□□ -1.87
SHFQ7M4L6 AC079781.2-201ENST00000446424 169 ntBASIC3.36□□□□□ -1.87
SHFQ7M4L6 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.36□□□□□ -1.87
SHFQ7M4L6 MTCO3P38-201ENST00000468910 766 ntBASIC3.36□□□□□ -1.87
SHFQ7M4L6 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.36□□□□□ -1.87
SHFQ7M4L6 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.36□□□□□ -1.87
SHFQ7M4L6 HSPD1P15-201ENST00000505573 1122 ntBASIC3.36□□□□□ -1.87
SHFQ7M4L6 MLLT10P2-201ENST00000506434 249 ntBASIC3.36□□□□□ -1.87
SHFQ7M4L6 AC004062.1-201ENST00000509926 645 ntBASIC3.36□□□□□ -1.87
SHFQ7M4L6 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.36□□□□□ -1.87
SHFQ7M4L6 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SHFQ7M4L6 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.36□□□□□ -1.87
SHFQ7M4L6 RAB9BP1-201ENST00000519581 626 ntBASIC3.36□□□□□ -1.87
SHFQ7M4L6 HMGB1P41-201ENST00000520234 440 ntBASIC3.36□□□□□ -1.87
SHFQ7M4L6 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.36□□□□□ -1.87
SHFQ7M4L6 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.36□□□□□ -1.87
SHFQ7M4L6 AC008011.1-201ENST00000545989 227 ntBASIC3.36□□□□□ -1.87
SHFQ7M4L6 RPL21P12-201ENST00000559810 515 ntBASIC3.36□□□□□ -1.87
SHFQ7M4L6 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.36□□□□□ -1.87
SHFQ7M4L6 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.36□□□□□ -1.87
SHFQ7M4L6 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms