Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 USP9YP36-201ENST00000424581 829 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 AL031736.2-201ENST00000426573 787 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 RABEPKP1-201ENST00000440529 1026 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 AL590365.1-201ENST00000450788 243 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.47□□□□□ -1.85
USP43Q70EL4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.47□□□□□ -1.85
USP43Q70EL4 AC006539.3-201ENST00000454258 129 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 RPL37P3-201ENST00000456825 293 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 RNA5SP246-201ENST00000458909 119 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 RN7SL542P-201ENST00000467147 294 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.47□□□□□ -1.85
USP43Q70EL4 KCTD9P5-201ENST00000504141 1170 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.47□□□□□ -1.85
USP43Q70EL4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.47□□□□□ -1.85
USP43Q70EL4 AC022447.3-201ENST00000506865 495 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.47□□□□□ -1.85
USP43Q70EL4 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.47□□□□□ -1.85
USP43Q70EL4 POU5F1P7-201ENST00000508759 541 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.47□□□□□ -1.85
USP43Q70EL4 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
USP43Q70EL4 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.47□□□□□ -1.85
USP43Q70EL4 MTND5P4-201ENST00000514978 288 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 RN7SKP13-201ENST00000515933 244 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 RNU1-45P-201ENST00000517191 141 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 ARL2BPP5-201ENST00000523141 481 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.47□□□□□ -1.85
USP43Q70EL4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.47□□□□□ -1.85
USP43Q70EL4 AL121821.2-201ENST00000556081 394 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 RN7SL600P-201ENST00000581811 299 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 MIR3668-201ENST00000582138 75 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.47□□□□□ -1.85
USP43Q70EL4 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.47□□□□□ -1.85
USP43Q70EL4 VN1R107P-201ENST00000601784 209 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 AC007687.1-201ENST00000602704 304 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 AC008739.3-201ENST00000603262 127 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 AC007363.1-201ENST00000604736 620 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 BCRP9-201ENST00000605312 388 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 AL355802.3-201ENST00000607571 545 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.47□□□□□ -1.85
USP43Q70EL4 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
USP43Q70EL4 AC024940.5-201ENST00000622889 474 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.47□□□□□ -1.85
USP43Q70EL4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.47□□□□□ -1.85
USP43Q70EL4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
USP43Q70EL4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.47□□□□□ -1.85
USP43Q70EL4 AC022031.1-201ENST00000585985 2593 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 MTND5P3-201ENST00000438536 1800 ntBASIC3.47□□□□□ -1.85
USP43Q70EL4 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
USP43Q70EL4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.85
USP43Q70EL4 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
USP43Q70EL4 ZNF33CP-201ENST00000432492 2030 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
USP43Q70EL4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
USP43Q70EL4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
USP43Q70EL4 RNU6-283P-201ENST00000364788 107 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
USP43Q70EL4 RNU6-767P-201ENST00000384132 107 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 RNU6-533P-201ENST00000384144 107 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
USP43Q70EL4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
USP43Q70EL4 RNU4-55P-201ENST00000410731 137 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 RN7SKP58-201ENST00000411010 305 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 PRELID3BP11-201ENST00000414230 479 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 AC017079.2-201ENST00000416102 485 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.46□□□□□ -1.86
USP43Q70EL4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.46□□□□□ -1.86
USP43Q70EL4 AC233981.1-201ENST00000423224 461 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.46□□□□□ -1.86
USP43Q70EL4 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.46□□□□□ -1.86
USP43Q70EL4 COX6B1P7-201ENST00000430845 235 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 AC024082.2-201ENST00000434771 238 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.46□□□□□ -1.86
USP43Q70EL4 AL138799.3-201ENST00000438968 350 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 AL358232.1-201ENST00000448030 501 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 NDUFA5P7-201ENST00000452914 242 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.46□□□□□ -1.86
USP43Q70EL4 MEMO1P3-201ENST00000459811 302 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 RPL7P15-201ENST00000461190 712 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 RPL21P103-201ENST00000479921 488 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.46□□□□□ -1.86
USP43Q70EL4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.46□□□□□ -1.86
USP43Q70EL4 AC010486.1-201ENST00000511793 424 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 AC105029.1-201ENST00000520250 669 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 AC013828.2-201ENST00000532487 235 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.46□□□□□ -1.86
USP43Q70EL4 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.46□□□□□ -1.86
USP43Q70EL4 RPL21P5-201ENST00000554662 472 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.46□□□□□ -1.86
USP43Q70EL4 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.46□□□□□ -1.86
USP43Q70EL4 AL355375.2-201ENST00000574825 175 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 AC053481.3-201ENST00000577881 843 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 MIR544B-201ENST00000582372 78 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 VN1R80P-201ENST00000597126 338 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 AC105429.2-201ENST00000610567 517 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 AC099778.2-201ENST00000610904 211 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 AL442067.1-201ENST00000613261 223 ntBASIC3.46□□□□□ -1.86
USP43Q70EL4 AC243773.3-201ENST00000613270 256 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms