Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 RNU6-264P-201ENST00000517134 104 ntBASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 AC009812.2-201ENST00000517657 457 ntBASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 EDDM3DP-201ENST00000554692 434 ntBASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 MIR4716-201ENST00000579628 84 ntBASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 AC092447.9-201ENST00000603395 144 ntBASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 AL359547.2-201ENST00000615810 418 ntBASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 AC067931.1-201ENST00000624190 671 ntBASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 MIR4496-201ENST00000635896 61 ntBASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 PABPC1P7-201ENST00000413177 1513 ntBASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
RNF111Q6ZNA4 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 RNU6-1059P-201ENST00000363752 98 ntBASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 RNU6-450P-201ENST00000364654 107 ntBASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 RNU6-99P-201ENST00000364721 107 ntBASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 RNA5SP56-201ENST00000410277 118 ntBASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 RPL21P103-201ENST00000479921 488 ntBASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 AP003385.6-201ENST00000531603 374 ntBASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 AL161423.1-201ENST00000613700 262 ntBASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 MIR7154-201ENST00000620673 73 ntBASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 AC099654.2-201ENST00000433031 1980 ntBASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF111Q6ZNA4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 AC000123.3-201ENST00000624029 4975 ntBASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 Y_RNA.485-201ENST00000384395 102 ntBASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 CYB5AP4-201ENST00000396692 399 ntBASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 AC110754.1-201ENST00000399740 601 ntBASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 OR2AM1P-201ENST00000422137 422 ntBASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 Z74021.1-201ENST00000423610 407 ntBASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 AC091812.1-201ENST00000432235 1948 ntBASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 AL359672.1-201ENST00000442302 409 ntBASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 AC112498.1-201ENST00000444401 332 ntBASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 RN7SL610P-201ENST00000463845 291 ntBASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 AC010655.3-201ENST00000478818 450 ntBASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 AC092451.1-201ENST00000480211 153 ntBASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 RN7SKP60-201ENST00000516985 239 ntBASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 IGLV3-26-201ENST00000520756 302 ntBASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 CYCSP27-201ENST00000527643 293 ntBASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 AC015912.2-201ENST00000571053 181 ntBASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 AC067852.3-201ENST00000589177 561 ntBASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 AC011494.1-201ENST00000596454 237 ntBASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 AC012669.1-201ENST00000603209 283 ntBASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 AC087783.2-201ENST00000605070 562 ntBASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RNF111Q6ZNA4 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.68
RNF111Q6ZNA4 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.59□□□□□ -1.68
RNF111Q6ZNA4 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.59□□□□□ -1.68
RNF111Q6ZNA4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 PHKBP1-201ENST00000450951 1951 ntBASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.58□□□□□ -1.68
RNF111Q6ZNA4 MAPK10-253ENST00000641010 4072 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms