Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AL445363.3-201ENST00000623080 671 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 MIR4496-201ENST00000635896 61 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 AC100778.3-201ENST00000580060 1750 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 RLIMP1-201ENST00000339626 1680 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 API5P2-201ENST00000397055 1498 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 RNU6-28P-201ENST00000362378 107 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 RNY3P13-201ENST00000365542 102 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 RNU4-70P-201ENST00000384579 139 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 RNU6-310P-201ENST00000384655 107 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 MIR558-201ENST00000384920 94 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 PTMAP2-201ENST00000397627 327 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 AL139397.2-201ENST00000404529 772 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 RNA5SP44-201ENST00000410446 133 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 RNU6-954P-201ENST00000411355 107 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 AC007389.2-201ENST00000434630 306 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 AC005019.1-201ENST00000436455 431 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 RPL12P25-201ENST00000455592 494 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 AC146944.2-203ENST00000502493 354 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 RPL39P5-202ENST00000512505 151 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 AC139495.1-202ENST00000513164 354 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 AC016065.2-201ENST00000514530 444 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 RNU6-513P-201ENST00000516104 104 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 RNU6-1213P-201ENST00000517075 94 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 DYNLL1P4-201ENST00000549314 266 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 RN7SL703P-201ENST00000578485 302 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 MIR5583-1-201ENST00000580941 59 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 MIR3672-201ENST00000584290 82 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 AC068790.3-201ENST00000602988 553 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 AL157817.1-201ENST00000614264 790 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 AL159972.1-201ENST00000625150 448 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 TAB3P1-202ENST00000452645 1634 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 NEAT1-202ENST00000501122 22743 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 MAPK10-320ENST00000641462 6696 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 AL049641.1-201ENST00000441055 1948 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 AC092376.2-201ENST00000622621 4116 ntBASIC4.7□□□□□ -1.66
CNKSR3Q6P9H4 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 MTND5P30-201ENST00000452896 1731 ntBASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 HSPE1P11-201ENST00000339579 310 ntBASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 RNU6-1040P-201ENST00000383974 107 ntBASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 RNU6-1029P-201ENST00000384109 107 ntBASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 RNU6-1207P-201ENST00000384343 107 ntBASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 AC097374.1-203ENST00000400783 485 ntBASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 Y_RNA.646-201ENST00000410980 101 ntBASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 AC096644.2-201ENST00000429278 159 ntBASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 AC093156.1-201ENST00000440382 670 ntBASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 CEACAMP4-201ENST00000457676 421 ntBASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 RPL35AP15-201ENST00000468042 339 ntBASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 AC020890.1-201ENST00000491837 504 ntBASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 AC020893.1-201ENST00000502452 580 ntBASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 RNA5SP73-201ENST00000516744 108 ntBASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 OR4P1P-201ENST00000530808 1136 ntBASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 RPL21P12-201ENST00000559810 515 ntBASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 AL008729.2-201ENST00000606393 473 ntBASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 Z82243.1-201ENST00000609432 473 ntBASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 AL390240.1-201ENST00000612950 384 ntBASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 AC131238.1-201ENST00000617135 328 ntBASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 AC098657.3-201ENST00000620434 263 ntBASIC4.69□□□□□ -1.66
CNKSR3Q6P9H4 AC000123.2-201ENST00000623124 461 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms