Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.14□□□□□ -2.23
LRRK2Q5S007 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.14□□□□□ -2.23
LRRK2Q5S007 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.14□□□□□ -2.23
LRRK2Q5S007 CBX3P8-201ENST00000532412 525 ntBASIC1.14□□□□□ -2.23
LRRK2Q5S007 AC009452.1-201ENST00000640823 606 ntBASIC1.14□□□□□ -2.23
LRRK2Q5S007 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.14□□□□□ -2.23
LRRK2Q5S007 Y_RNA.280-201ENST00000364765 112 ntBASIC1.14□□□□□ -2.23
LRRK2Q5S007 MIR1304-201ENST00000408243 91 ntBASIC1.14□□□□□ -2.23
LRRK2Q5S007 RPL17P12-201ENST00000413391 526 ntBASIC1.14□□□□□ -2.23
LRRK2Q5S007 XIST-201ENST00000416330 750 ntTSL 2 BASIC1.14□□□□□ -2.23
LRRK2Q5S007 AC006483.1-201ENST00000487308 313 ntBASIC1.14□□□□□ -2.23
LRRK2Q5S007 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.14□□□□□ -2.23
LRRK2Q5S007 AC093752.1-206ENST00000511823 336 ntBASIC1.14□□□□□ -2.23
LRRK2Q5S007 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.14□□□□□ -2.23
LRRK2Q5S007 BNIP3P26-201ENST00000600827 554 ntBASIC1.14□□□□□ -2.23
LRRK2Q5S007 AL020996.3-201ENST00000606617 222 ntBASIC1.14□□□□□ -2.23
LRRK2Q5S007 AL121594.5-201ENST00000631724 573 ntBASIC1.14□□□□□ -2.23
LRRK2Q5S007 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.13□□□□□ -2.23
LRRK2Q5S007 RPL26P37-201ENST00000411983 438 ntBASIC1.13□□□□□ -2.23
LRRK2Q5S007 AL445669.1-201ENST00000426743 755 ntBASIC1.13□□□□□ -2.23
LRRK2Q5S007 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.13□□□□□ -2.23
LRRK2Q5S007 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.13□□□□□ -2.23
LRRK2Q5S007 AC073413.2-201ENST00000604332 360 ntBASIC1.13□□□□□ -2.23
LRRK2Q5S007 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.13□□□□□ -2.23
LRRK2Q5S007 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
LRRK2Q5S007 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.13□□□□□ -2.23
LRRK2Q5S007 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
LRRK2Q5S007 Y_RNA.571-201ENST00000384753 98 ntBASIC1.13□□□□□ -2.23
LRRK2Q5S007 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.13□□□□□ -2.23
LRRK2Q5S007 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.13□□□□□ -2.23
LRRK2Q5S007 AL161713.1-201ENST00000555538 145 ntBASIC1.13□□□□□ -2.23
LRRK2Q5S007 AC233266.2-201ENST00000567067 528 ntBASIC1.13□□□□□ -2.23
LRRK2Q5S007 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC1.12□□□□□ -2.23
LRRK2Q5S007 MIR409-201ENST00000362237 79 ntBASIC1.12□□□□□ -2.23
LRRK2Q5S007 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.12□□□□□ -2.23
LRRK2Q5S007 AC090774.1-201ENST00000435925 246 ntBASIC1.12□□□□□ -2.23
LRRK2Q5S007 NEFMP1-201ENST00000443423 1006 ntBASIC1.12□□□□□ -2.23
LRRK2Q5S007 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.12□□□□□ -2.23
LRRK2Q5S007 CFTRP1-201ENST00000456646 183 ntBASIC1.12□□□□□ -2.23
LRRK2Q5S007 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.12□□□□□ -2.23
LRRK2Q5S007 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC1.12□□□□□ -2.23
LRRK2Q5S007 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC1.12□□□□□ -2.23
LRRK2Q5S007 AL159169.2-201ENST00000610061 1269 ntBASIC1.12□□□□□ -2.23
LRRK2Q5S007 AL590099.1-201ENST00000615276 138 ntBASIC1.12□□□□□ -2.23
LRRK2Q5S007 VTRNA1-1-201ENST00000363120 99 ntBASIC1.12□□□□□ -2.23
LRRK2Q5S007 SNORD48-201ENST00000364953 64 ntBASIC1.12□□□□□ -2.23
LRRK2Q5S007 SNORA18.2-201ENST00000383865 132 ntBASIC1.12□□□□□ -2.23
LRRK2Q5S007 AC016769.3-201ENST00000396562 315 ntBASIC1.12□□□□□ -2.23
LRRK2Q5S007 TATDN1P1-201ENST00000414123 891 ntBASIC1.12□□□□□ -2.23
LRRK2Q5S007 CYCSP33-201ENST00000414485 327 ntBASIC1.12□□□□□ -2.23
LRRK2Q5S007 AL357078.2-201ENST00000416486 427 ntBASIC1.12□□□□□ -2.23
LRRK2Q5S007 MRPS36P1-201ENST00000421291 307 ntBASIC1.12□□□□□ -2.23
LRRK2Q5S007 Z95118.1-201ENST00000421372 247 ntBASIC1.12□□□□□ -2.23
LRRK2Q5S007 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.12□□□□□ -2.23
LRRK2Q5S007 RSL24D1P2-201ENST00000445584 366 ntBASIC1.12□□□□□ -2.23
LRRK2Q5S007 BMI1P1-201ENST00000445879 941 ntBASIC1.12□□□□□ -2.23
LRRK2Q5S007 OR9N1P-202ENST00000494289 481 ntBASIC1.12□□□□□ -2.23
LRRK2Q5S007 RNA5SP309-201ENST00000516670 106 ntBASIC1.12□□□□□ -2.23
LRRK2Q5S007 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.12□□□□□ -2.23
LRRK2Q5S007 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
LRRK2Q5S007 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
LRRK2Q5S007 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.12□□□□□ -2.23
LRRK2Q5S007 AC146944.4-201ENST00000602697 718 ntBASIC1.12□□□□□ -2.23
LRRK2Q5S007 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
LRRK2Q5S007 AP000676.4-201ENST00000624659 623 ntBASIC1.12□□□□□ -2.23
LRRK2Q5S007 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.12□□□□□ -2.23
LRRK2Q5S007 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.11□□□□□ -2.23
LRRK2Q5S007 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
LRRK2Q5S007 Y_RNA.132-201ENST00000363421 102 ntBASIC1.11□□□□□ -2.23
LRRK2Q5S007 RNY3-201ENST00000365484 102 ntBASIC1.11□□□□□ -2.23
LRRK2Q5S007 Z85995.1-201ENST00000415547 335 ntBASIC1.11□□□□□ -2.23
LRRK2Q5S007 RNU1-92P-201ENST00000517017 135 ntBASIC1.11□□□□□ -2.23
LRRK2Q5S007 AP003033.1-201ENST00000527244 415 ntBASIC1.11□□□□□ -2.23
LRRK2Q5S007 AC116447.1-201ENST00000613153 453 ntBASIC1.11□□□□□ -2.23
LRRK2Q5S007 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.11□□□□□ -2.23
LRRK2Q5S007 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.11□□□□□ -2.23
LRRK2Q5S007 MTND4P31-201ENST00000425607 1343 ntBASIC1.11□□□□□ -2.23
LRRK2Q5S007 AC012321.1-201ENST00000561622 1588 ntBASIC1.11□□□□□ -2.23
LRRK2Q5S007 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
LRRK2Q5S007 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.11□□□□□ -2.23
LRRK2Q5S007 ARL5AP2-201ENST00000444698 533 ntBASIC1.11□□□□□ -2.23
LRRK2Q5S007 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC1.11□□□□□ -2.23
LRRK2Q5S007 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.11□□□□□ -2.23
LRRK2Q5S007 GLUD1P4-201ENST00000590914 418 ntBASIC1.11□□□□□ -2.23
LRRK2Q5S007 DUXAP3-201ENST00000603616 594 ntBASIC1.11□□□□□ -2.23
LRRK2Q5S007 AC108706.1-201ENST00000611053 297 ntBASIC1.11□□□□□ -2.23
LRRK2Q5S007 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.11□□□□□ -2.23
LRRK2Q5S007 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
LRRK2Q5S007 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.1□□□□□ -2.23
LRRK2Q5S007 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.1□□□□□ -2.23
LRRK2Q5S007 U8.9-201ENST00000365667 134 ntBASIC1.1□□□□□ -2.23
LRRK2Q5S007 CYCSP48-201ENST00000417124 323 ntBASIC1.1□□□□□ -2.23
LRRK2Q5S007 AC114973.1-201ENST00000429057 632 ntBASIC1.1□□□□□ -2.23
LRRK2Q5S007 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.1□□□□□ -2.23
LRRK2Q5S007 RN7SKP265-201ENST00000516448 223 ntBASIC1.1□□□□□ -2.23
LRRK2Q5S007 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.1□□□□□ -2.23
LRRK2Q5S007 AC006270.2-201ENST00000578523 652 ntBASIC1.1□□□□□ -2.23
LRRK2Q5S007 AC097504.2-201ENST00000608088 454 ntBASIC1.1□□□□□ -2.23
LRRK2Q5S007 AC110491.1-201ENST00000562191 2010 ntBASIC1.1□□□□□ -2.23
LRRK2Q5S007 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms