Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 DEFB109C-201ENST00000382575 264 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 DEFB109B-201ENST00000382656 264 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 U1.1-201ENST00000384101 164 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 RNU6-456P-201ENST00000384493 107 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 CALM2P3-201ENST00000400429 449 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 RPL30P2-201ENST00000414021 291 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 UBE2V1P10-201ENST00000414685 269 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 CRYBB2P1-203ENST00000415709 538 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 AL691449.1-201ENST00000426570 421 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 AC002486.1-201ENST00000435098 391 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 AC020550.1-201ENST00000447385 163 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 SNORD97-201ENST00000459187 142 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 RPL9P32-201ENST00000464118 620 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 AL049830.2-201ENST00000480072 201 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 AC023194.1-201ENST00000493084 308 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 RAC1P2-201ENST00000511164 579 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 AC105914.1-201ENST00000511798 226 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 RNA5SP208-201ENST00000516156 78 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 RNU6-410P-201ENST00000517006 107 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 IGKV2D-19-201ENST00000523346 262 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 RPL21P12-201ENST00000559810 515 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 AP001029.3-201ENST00000588063 596 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 AL121992.2-201ENST00000606262 256 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 AC126118.1-201ENST00000607744 628 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 AC079684.1-201ENST00000621405 437 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 AL359880.1-201ENST00000621879 266 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 CEP170P1-201ENST00000502249 4587 ntBASIC3.6□□□□□ -1.83
RUNDC3AQ59EK9 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 RNA5SP130-201ENST00000364431 114 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 RNU6-74P-201ENST00000384235 107 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 MIR1-2-201ENST00000384961 85 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 MTCO3P40-201ENST00000392516 676 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 RPL17P50-201ENST00000396131 546 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 NDUFS5P1-201ENST00000405668 289 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 RNU6-648P-201ENST00000410190 107 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 RNA5SP129-201ENST00000410276 118 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 AC002075.2-201ENST00000425207 252 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 MED13P1-201ENST00000428342 171 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 MTND3P21-201ENST00000433774 331 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 PSPHP1-201ENST00000450062 261 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 HMGN2P16-201ENST00000456802 261 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 RPL23AP62-201ENST00000463396 453 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 HMGB3P15-201ENST00000507326 574 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 RNA5SP468-201ENST00000516782 93 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 RNU6-1092P-201ENST00000516955 87 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 NRON-201ENST00000517270 370 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 AL355836.1-201ENST00000555951 870 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 MIR3921-201ENST00000577308 85 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 AC098848.2-201ENST00000588023 330 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 AC025165.5-201ENST00000602802 578 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 DPPA3P3-201ENST00000603842 430 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 CR381653.2-201ENST00000624041 768 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 AC009161.2-201ENST00000624626 138 ntBASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.59□□□□□ -1.83
RUNDC3AQ59EK9 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
RUNDC3AQ59EK9 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
RUNDC3AQ59EK9 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.58□□□□□ -1.84
RUNDC3AQ59EK9 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RUNDC3AQ59EK9 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RUNDC3AQ59EK9 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RUNDC3AQ59EK9 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RUNDC3AQ59EK9 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RUNDC3AQ59EK9 RNU6-1097P-201ENST00000363586 107 ntBASIC3.58□□□□□ -1.84
RUNDC3AQ59EK9 Y_RNA.367-201ENST00000365544 101 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms