Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC093677.1-201ENST00000514414 678 ntBASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 AC007536.1-201ENST00000533382 349 ntBASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 AC009097.3-201ENST00000563557 1018 ntBASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 OR4K8P-201ENST00000578842 1048 ntBASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 AC083760.1-201ENST00000589621 670 ntBASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 AC020895.1-201ENST00000595362 272 ntBASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 VN1R78P-201ENST00000597393 564 ntBASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 AC131902.3-201ENST00000611767 581 ntBASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 AC084035.1-201ENST00000634543 607 ntBASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 AP000776.1-201ENST00000530032 1663 ntBASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 AC008568.2-201ENST00000623862 2313 ntBASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SHROOM1Q2M3G4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SHROOM1Q2M3G4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 RNU6-83P-201ENST00000384568 112 ntBASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 RNU6-952P-201ENST00000391164 108 ntBASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 AL139039.1-201ENST00000401900 692 ntBASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 RNU2-25P-201ENST00000411041 191 ntBASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 USP9YP33-201ENST00000412220 421 ntBASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 AL008987.1-201ENST00000415528 237 ntBASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 AL035407.1-201ENST00000429211 571 ntBASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 USP9YP35-201ENST00000435696 412 ntBASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 YWHAZP7-201ENST00000436906 631 ntBASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 RPL21P2-201ENST00000440049 481 ntBASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 EEF1E1P1-201ENST00000446998 430 ntBASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 AC118282.1-201ENST00000506408 765 ntBASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 AC006445.2-201ENST00000510061 472 ntBASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 AC093281.2-201ENST00000510153 597 ntBASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 AC006499.2-201ENST00000513470 337 ntBASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 RNU6-56P-201ENST00000516986 93 ntBASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 CYCSP2-201ENST00000558168 301 ntBASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 AC068880.5-201ENST00000624331 290 ntBASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SHROOM1Q2M3G4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 AC004944.1-201ENST00000517807 3059 ntBASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 MIR493-201ENST00000385254 89 ntBASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 AL451074.5-201ENST00000415894 435 ntBASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 MUPP-201ENST00000438111 566 ntBASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 Z82190.1-201ENST00000454534 490 ntBASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 AC097493.1-201ENST00000463958 372 ntBASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 RPL7P18-201ENST00000478965 734 ntBASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 AC114981.1-201ENST00000503897 678 ntBASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 AL359273.1-201ENST00000510918 627 ntBASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 AC109329.2-201ENST00000519658 482 ntBASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 DEFB131D-201ENST00000526803 184 ntBASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 AL512310.1-201ENST00000548639 172 ntBASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 MIR4760-201ENST00000585040 80 ntBASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 AC061975.8-201ENST00000587058 721 ntBASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 AL390208.1-201ENST00000605885 644 ntBASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 AC090115.4-201ENST00000609970 188 ntBASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 AC245297.2-201ENST00000610119 565 ntBASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 AC097478.2-201ENST00000610572 514 ntBASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 AL139418.1-201ENST00000613613 177 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms