Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 AL672167.1-206ENST00000356293 943 ntBASIC3.81□□□□□ -1.8
CCDC96Q2M329 Y_RNA.51-201ENST00000362725 102 ntBASIC3.81□□□□□ -1.8
CCDC96Q2M329 RNU4-21P-201ENST00000362802 126 ntBASIC3.81□□□□□ -1.8
CCDC96Q2M329 RNA5SP139-201ENST00000364340 117 ntBASIC3.81□□□□□ -1.8
CCDC96Q2M329 AP002088.1-201ENST00000382740 395 ntBASIC3.81□□□□□ -1.8
CCDC96Q2M329 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC96Q2M329 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC96Q2M329 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC96Q2M329 AL353678.1-201ENST00000422735 741 ntBASIC3.81□□□□□ -1.8
CCDC96Q2M329 AL512649.1-201ENST00000428997 581 ntBASIC3.81□□□□□ -1.8
CCDC96Q2M329 AL356867.1-201ENST00000429623 299 ntBASIC3.81□□□□□ -1.8
CCDC96Q2M329 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC96Q2M329 UBE2FP3-201ENST00000436366 524 ntBASIC3.81□□□□□ -1.8
CCDC96Q2M329 NDUFB4P6-201ENST00000436819 366 ntBASIC3.81□□□□□ -1.8
CCDC96Q2M329 ATP5C1P1-201ENST00000441945 895 ntBASIC3.81□□□□□ -1.8
CCDC96Q2M329 AC115115.1-201ENST00000449927 248 ntBASIC3.81□□□□□ -1.8
CCDC96Q2M329 AC006539.3-201ENST00000454258 129 ntBASIC3.81□□□□□ -1.8
CCDC96Q2M329 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC96Q2M329 DSTNP2-201ENST00000504533 515 ntBASIC3.81□□□□□ -1.8
CCDC96Q2M329 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC96Q2M329 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.81□□□□□ -1.8
CCDC96Q2M329 ACTR3BP3-201ENST00000565577 979 ntBASIC3.81□□□□□ -1.8
CCDC96Q2M329 AC105224.1-201ENST00000587055 421 ntBASIC3.81□□□□□ -1.8
CCDC96Q2M329 AC012493.2-201ENST00000595083 291 ntBASIC3.81□□□□□ -1.8
CCDC96Q2M329 AF131215.7-201ENST00000602443 707 ntBASIC3.81□□□□□ -1.8
CCDC96Q2M329 AL390208.1-201ENST00000605885 644 ntBASIC3.81□□□□□ -1.8
CCDC96Q2M329 uc_338.1-201ENST00000612113 180 ntBASIC3.81□□□□□ -1.8
CCDC96Q2M329 AL357080.1-201ENST00000617394 239 ntBASIC3.81□□□□□ -1.8
CCDC96Q2M329 SNORD39.4-201ENST00000620099 78 ntBASIC3.81□□□□□ -1.8
CCDC96Q2M329 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.81□□□□□ -1.8
CCDC96Q2M329 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CCDC96Q2M329 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC96Q2M329 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC96Q2M329 FAM35BP-202ENST00000497389 3337 ntBASIC3.8□□□□□ -1.8
CCDC96Q2M329 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC96Q2M329 AL390237.1-201ENST00000404226 1415 ntBASIC3.8□□□□□ -1.8
CCDC96Q2M329 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC96Q2M329 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC96Q2M329 RNU6-462P-201ENST00000362659 105 ntBASIC3.8□□□□□ -1.8
CCDC96Q2M329 RNA5SP374-201ENST00000362939 125 ntBASIC3.8□□□□□ -1.8
CCDC96Q2M329 RNU6-799P-201ENST00000363567 107 ntBASIC3.8□□□□□ -1.8
CCDC96Q2M329 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.8□□□□□ -1.8
CCDC96Q2M329 RNA5SP88-201ENST00000365560 109 ntBASIC3.8□□□□□ -1.8
CCDC96Q2M329 AL031121.1-201ENST00000406553 254 ntBASIC3.8□□□□□ -1.8
CCDC96Q2M329 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC96Q2M329 TPMTP2-201ENST00000414372 726 ntBASIC3.8□□□□□ -1.8
CCDC96Q2M329 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC96Q2M329 AL590383.1-201ENST00000428602 75 ntBASIC3.8□□□□□ -1.8
CCDC96Q2M329 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC96Q2M329 ZYG11AP1-201ENST00000430329 837 ntBASIC3.8□□□□□ -1.8
CCDC96Q2M329 CYCSP32-201ENST00000440548 321 ntBASIC3.8□□□□□ -1.8
CCDC96Q2M329 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC96Q2M329 AC010401.1-201ENST00000463867 348 ntBASIC3.8□□□□□ -1.8
CCDC96Q2M329 AC072039.1-201ENST00000477611 581 ntBASIC3.8□□□□□ -1.8
CCDC96Q2M329 RPS4XP22-201ENST00000480755 780 ntBASIC3.8□□□□□ -1.8
CCDC96Q2M329 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC96Q2M329 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC96Q2M329 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC96Q2M329 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC96Q2M329 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC96Q2M329 AC007115.1-201ENST00000546853 234 ntBASIC3.8□□□□□ -1.8
CCDC96Q2M329 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC96Q2M329 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.8□□□□□ -1.8
CCDC96Q2M329 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.8□□□□□ -1.8
CCDC96Q2M329 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC96Q2M329 AC008507.1-201ENST00000587506 734 ntBASIC3.8□□□□□ -1.8
CCDC96Q2M329 AC064872.1-201ENST00000604823 1072 ntBASIC3.8□□□□□ -1.8
CCDC96Q2M329 AP000254.1-201ENST00000609934 520 ntBASIC3.8□□□□□ -1.8
CCDC96Q2M329 MIR8057-201ENST00000620957 69 ntBASIC3.8□□□□□ -1.8
CCDC96Q2M329 AC110801.1-201ENST00000623590 212 ntBASIC3.8□□□□□ -1.8
CCDC96Q2M329 AC079228.1-201ENST00000624774 1049 ntBASIC3.8□□□□□ -1.8
CCDC96Q2M329 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC96Q2M329 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC96Q2M329 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC96Q2M329 TPTE2P4-201ENST00000258589 1605 ntBASIC3.8□□□□□ -1.8
CCDC96Q2M329 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC96Q2M329 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC96Q2M329 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCDC96Q2M329 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
CCDC96Q2M329 MT-TH-201ENST00000387441 69 ntBASIC3.79□□□□□ -1.8
CCDC96Q2M329 RNU6-1197P-201ENST00000391183 107 ntBASIC3.79□□□□□ -1.8
CCDC96Q2M329 SNORA26.8-201ENST00000391306 124 ntBASIC3.79□□□□□ -1.8
CCDC96Q2M329 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC96Q2M329 TPMTP3-201ENST00000411928 735 ntBASIC3.79□□□□□ -1.8
CCDC96Q2M329 BTF3L4P1-201ENST00000413813 468 ntBASIC3.79□□□□□ -1.8
CCDC96Q2M329 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC96Q2M329 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC96Q2M329 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC96Q2M329 SAR1AP4-201ENST00000429225 591 ntBASIC3.79□□□□□ -1.8
CCDC96Q2M329 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC96Q2M329 MTCO2P16-201ENST00000436962 677 ntBASIC3.79□□□□□ -1.8
CCDC96Q2M329 LARP1BP3-201ENST00000437229 869 ntBASIC3.79□□□□□ -1.8
CCDC96Q2M329 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC96Q2M329 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC96Q2M329 EEF1E1P1-201ENST00000446998 430 ntBASIC3.79□□□□□ -1.8
CCDC96Q2M329 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC96Q2M329 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC96Q2M329 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC96Q2M329 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC96Q2M329 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms