Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 RNF6P1-201ENST00000444889 1784 ntBASIC1.34□□□□□ -2.19
CACNA1EQ15878 CDC27P3-201ENST00000635418 1910 ntBASIC1.34□□□□□ -2.19
CACNA1EQ15878 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.34□□□□□ -2.2
CACNA1EQ15878 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
CACNA1EQ15878 RNU6-1080P-201ENST00000383982 107 ntBASIC1.34□□□□□ -2.2
CACNA1EQ15878 RNU6-516P-201ENST00000411381 104 ntBASIC1.34□□□□□ -2.2
CACNA1EQ15878 UBBP3-201ENST00000445497 241 ntBASIC1.34□□□□□ -2.2
CACNA1EQ15878 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.34□□□□□ -2.2
CACNA1EQ15878 AC087373.1-201ENST00000524920 491 ntBASIC1.34□□□□□ -2.2
CACNA1EQ15878 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.34□□□□□ -2.2
CACNA1EQ15878 AP003033.1-201ENST00000527244 415 ntBASIC1.34□□□□□ -2.2
CACNA1EQ15878 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.34□□□□□ -2.2
CACNA1EQ15878 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.34□□□□□ -2.2
CACNA1EQ15878 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.34□□□□□ -2.2
CACNA1EQ15878 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CACNA1EQ15878 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.33□□□□□ -2.2
CACNA1EQ15878 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CACNA1EQ15878 MIR153-1-201ENST00000384914 90 ntBASIC1.33□□□□□ -2.2
CACNA1EQ15878 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.33□□□□□ -2.2
CACNA1EQ15878 AC244098.2-201ENST00000422068 99 ntBASIC1.33□□□□□ -2.2
CACNA1EQ15878 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.33□□□□□ -2.2
CACNA1EQ15878 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CACNA1EQ15878 snoU109.4-201ENST00000458953 143 ntBASIC1.33□□□□□ -2.2
CACNA1EQ15878 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CACNA1EQ15878 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CACNA1EQ15878 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.33□□□□□ -2.2
CACNA1EQ15878 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CACNA1EQ15878 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.33□□□□□ -2.2
CACNA1EQ15878 SNORA14A-201ENST00000364773 135 ntBASIC1.33□□□□□ -2.2
CACNA1EQ15878 CD24P4-201ENST00000382840 243 ntBASIC1.33□□□□□ -2.2
CACNA1EQ15878 SNRPEP2-201ENST00000397592 279 ntBASIC1.33□□□□□ -2.2
CACNA1EQ15878 RPS12P24-201ENST00000412619 387 ntBASIC1.33□□□□□ -2.2
CACNA1EQ15878 UBE2V1P6-201ENST00000430840 422 ntBASIC1.33□□□□□ -2.2
CACNA1EQ15878 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.33□□□□□ -2.2
CACNA1EQ15878 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
CACNA1EQ15878 HSFY3P-201ENST00000444242 1191 ntBASIC1.33□□□□□ -2.2
CACNA1EQ15878 AC096586.2-201ENST00000610260 441 ntBASIC1.33□□□□□ -2.2
CACNA1EQ15878 AC008121.3-201ENST00000618726 433 ntBASIC1.33□□□□□ -2.2
CACNA1EQ15878 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CACNA1EQ15878 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
CACNA1EQ15878 MIR320A-201ENST00000385302 82 ntBASIC1.32□□□□□ -2.2
CACNA1EQ15878 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.32□□□□□ -2.2
CACNA1EQ15878 BX682237.1-201ENST00000415016 335 ntBASIC1.32□□□□□ -2.2
CACNA1EQ15878 AL365400.1-201ENST00000431854 640 ntBASIC1.32□□□□□ -2.2
CACNA1EQ15878 AL591704.1-201ENST00000432574 275 ntBASIC1.32□□□□□ -2.2
CACNA1EQ15878 CKS1BP5-201ENST00000434172 273 ntBASIC1.32□□□□□ -2.2
CACNA1EQ15878 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.32□□□□□ -2.2
CACNA1EQ15878 OR51B8P-201ENST00000449892 769 ntBASIC1.32□□□□□ -2.2
CACNA1EQ15878 AC090515.1-201ENST00000465295 476 ntBASIC1.32□□□□□ -2.2
CACNA1EQ15878 RPL21P103-201ENST00000479921 488 ntBASIC1.32□□□□□ -2.2
CACNA1EQ15878 MTCO3P35-201ENST00000485582 781 ntBASIC1.32□□□□□ -2.2
CACNA1EQ15878 AC097468.3-201ENST00000607956 456 ntBASIC1.32□□□□□ -2.2
CACNA1EQ15878 AL390240.1-201ENST00000612950 384 ntBASIC1.32□□□□□ -2.2
CACNA1EQ15878 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CACNA1EQ15878 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.32□□□□□ -2.2
CACNA1EQ15878 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.32□□□□□ -2.2
CACNA1EQ15878 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.32□□□□□ -2.2
CACNA1EQ15878 AC011477.1-204ENST00000623416 1325 ntBASIC1.32□□□□□ -2.2
CACNA1EQ15878 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CACNA1EQ15878 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CACNA1EQ15878 RNU6-50P-201ENST00000362356 103 ntBASIC1.32□□□□□ -2.2
CACNA1EQ15878 MIR144-201ENST00000384886 86 ntBASIC1.32□□□□□ -2.2
CACNA1EQ15878 HMGN1P14-201ENST00000412459 517 ntBASIC1.32□□□□□ -2.2
CACNA1EQ15878 RPL21P131-201ENST00000497298 483 ntBASIC1.32□□□□□ -2.2
CACNA1EQ15878 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.32□□□□□ -2.2
CACNA1EQ15878 RPPH1-2P-201ENST00000516688 293 ntBASIC1.32□□□□□ -2.2
CACNA1EQ15878 OR6C73P-201ENST00000546432 358 ntBASIC1.32□□□□□ -2.2
CACNA1EQ15878 NOP56P3-201ENST00000549457 385 ntBASIC1.32□□□□□ -2.2
CACNA1EQ15878 AC068135.2-201ENST00000569293 1028 ntBASIC1.32□□□□□ -2.2
CACNA1EQ15878 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CACNA1EQ15878 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
CACNA1EQ15878 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CACNA1EQ15878 MIR625-201ENST00000385047 85 ntBASIC1.31□□□□□ -2.2
CACNA1EQ15878 AC109780.2-201ENST00000413467 845 ntBASIC1.31□□□□□ -2.2
CACNA1EQ15878 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC1.31□□□□□ -2.2
CACNA1EQ15878 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.31□□□□□ -2.2
CACNA1EQ15878 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC1.31□□□□□ -2.2
CACNA1EQ15878 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC1.31□□□□□ -2.2
CACNA1EQ15878 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.31□□□□□ -2.2
CACNA1EQ15878 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.31□□□□□ -2.2
CACNA1EQ15878 AC004223.1-201ENST00000479840 271 ntBASIC1.31□□□□□ -2.2
CACNA1EQ15878 AC008885.2-201ENST00000509506 930 ntBASIC1.31□□□□□ -2.2
CACNA1EQ15878 RNA5SP476-201ENST00000516613 103 ntBASIC1.31□□□□□ -2.2
CACNA1EQ15878 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.31□□□□□ -2.2
CACNA1EQ15878 SETP2-201ENST00000553886 926 ntBASIC1.31□□□□□ -2.2
CACNA1EQ15878 AL121821.2-201ENST00000556081 394 ntBASIC1.31□□□□□ -2.2
CACNA1EQ15878 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.31□□□□□ -2.2
CACNA1EQ15878 ACTR3BP3-201ENST00000565577 979 ntBASIC1.31□□□□□ -2.2
CACNA1EQ15878 AL355816.1-201ENST00000607951 118 ntBASIC1.31□□□□□ -2.2
CACNA1EQ15878 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CACNA1EQ15878 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.31□□□□□ -2.2
CACNA1EQ15878 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CACNA1EQ15878 MIR607-201ENST00000385241 96 ntBASIC1.31□□□□□ -2.2
CACNA1EQ15878 MTND1P23-201ENST00000416931 372 ntBASIC1.31□□□□□ -2.2
CACNA1EQ15878 MTATP6P4-201ENST00000427725 675 ntBASIC1.31□□□□□ -2.2
CACNA1EQ15878 Z96811.1-201ENST00000445880 108 ntBASIC1.31□□□□□ -2.2
CACNA1EQ15878 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.31□□□□□ -2.2
CACNA1EQ15878 RFC5P1-201ENST00000454419 874 ntBASIC1.31□□□□□ -2.2
CACNA1EQ15878 TRBV8-1-201ENST00000481590 279 ntBASIC1.31□□□□□ -2.2
CACNA1EQ15878 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 188.5 ms