Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SNORA38-201ENST00000363946 132 ntBASIC0.67□□□□□ -2.3
RPL39P62891 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
RPL39P62891 RNA5SP252-201ENST00000391131 119 ntBASIC0.67□□□□□ -2.3
RPL39P62891 RNU4-62P-201ENST00000410125 130 ntBASIC0.67□□□□□ -2.3
RPL39P62891 OR9R1P-201ENST00000412200 877 ntBASIC0.67□□□□□ -2.3
RPL39P62891 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC0.67□□□□□ -2.3
RPL39P62891 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC0.67□□□□□ -2.3
RPL39P62891 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC0.67□□□□□ -2.3
RPL39P62891 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.67□□□□□ -2.3
RPL39P62891 AC244033.1-201ENST00000426826 870 ntBASIC0.67□□□□□ -2.3
RPL39P62891 RPS7P2-201ENST00000435134 607 ntBASIC0.67□□□□□ -2.3
RPL39P62891 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.67□□□□□ -2.3
RPL39P62891 BX322784.1-201ENST00000455793 1077 ntBASIC0.67□□□□□ -2.3
RPL39P62891 SUMO2P2-201ENST00000456482 255 ntBASIC0.67□□□□□ -2.3
RPL39P62891 AC008526.1-201ENST00000509149 338 ntBASIC0.67□□□□□ -2.3
RPL39P62891 RNU4-60P-201ENST00000517239 135 ntBASIC0.67□□□□□ -2.3
RPL39P62891 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.67□□□□□ -2.3
RPL39P62891 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC0.67□□□□□ -2.3
RPL39P62891 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC0.67□□□□□ -2.3
RPL39P62891 MIR4295-201ENST00000585286 85 ntBASIC0.67□□□□□ -2.3
RPL39P62891 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC0.67□□□□□ -2.3
RPL39P62891 BNIP3P19-201ENST00000605397 577 ntBASIC0.67□□□□□ -2.3
RPL39P62891 AL592148.2-201ENST00000612210 372 ntBASIC0.67□□□□□ -2.3
RPL39P62891 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
RPL39P62891 MTND5P3-201ENST00000438536 1800 ntBASIC0.66□□□□□ -2.3
RPL39P62891 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
RPL39P62891 ICE2P2-201ENST00000483823 2787 ntBASIC0.66□□□□□ -2.3
RPL39P62891 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
RPL39P62891 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
RPL39P62891 MTND4LP20-201ENST00000402379 270 ntBASIC0.66□□□□□ -2.3
RPL39P62891 AL512604.1-201ENST00000404812 257 ntBASIC0.66□□□□□ -2.3
RPL39P62891 AL356432.1-201ENST00000405809 419 ntBASIC0.66□□□□□ -2.3
RPL39P62891 RPL30P13-201ENST00000418873 348 ntBASIC0.66□□□□□ -2.3
RPL39P62891 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC0.66□□□□□ -2.3
RPL39P62891 RPS6P15-201ENST00000431996 751 ntBASIC0.66□□□□□ -2.3
RPL39P62891 HMGN2P18-201ENST00000450680 270 ntBASIC0.66□□□□□ -2.3
RPL39P62891 AC087343.1-201ENST00000477341 475 ntBASIC0.66□□□□□ -2.3
RPL39P62891 RPS27P23-201ENST00000487608 251 ntBASIC0.66□□□□□ -2.3
RPL39P62891 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC0.66□□□□□ -2.3
RPL39P62891 OR5H4P-201ENST00000510851 923 ntBASIC0.66□□□□□ -2.3
RPL39P62891 AC093770.1-201ENST00000511559 571 ntBASIC0.66□□□□□ -2.3
RPL39P62891 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.66□□□□□ -2.3
RPL39P62891 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC0.66□□□□□ -2.3
RPL39P62891 OR4P1P-201ENST00000530808 1136 ntBASIC0.66□□□□□ -2.3
RPL39P62891 EIF5A2P1-201ENST00000564027 460 ntBASIC0.66□□□□□ -2.3
RPL39P62891 MIR4299-201ENST00000577899 72 ntBASIC0.66□□□□□ -2.3
RPL39P62891 OR1M4P-201ENST00000589199 287 ntBASIC0.66□□□□□ -2.3
RPL39P62891 AL161423.1-201ENST00000613700 262 ntBASIC0.66□□□□□ -2.3
RPL39P62891 U73479.1-201ENST00000618062 168 ntBASIC0.66□□□□□ -2.3
RPL39P62891 AC022079.2-201ENST00000619739 566 ntBASIC0.66□□□□□ -2.3
RPL39P62891 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.66□□□□□ -2.3
RPL39P62891 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
RPL39P62891 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.65□□□□□ -2.31
RPL39P62891 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
RPL39P62891 RNU4-51P-201ENST00000364206 140 ntBASIC0.65□□□□□ -2.31
RPL39P62891 RNU6-1187P-201ENST00000364771 110 ntBASIC0.65□□□□□ -2.31
RPL39P62891 RNA5SP213-201ENST00000391031 106 ntBASIC0.65□□□□□ -2.31
RPL39P62891 RNU4-65P-201ENST00000410473 140 ntBASIC0.65□□□□□ -2.31
RPL39P62891 RPL23AP36-201ENST00000413895 458 ntBASIC0.65□□□□□ -2.31
RPL39P62891 SNRPEP10-201ENST00000420249 274 ntBASIC0.65□□□□□ -2.31
RPL39P62891 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC0.65□□□□□ -2.31
RPL39P62891 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC0.65□□□□□ -2.31
RPL39P62891 AL353898.1-201ENST00000444055 238 ntBASIC0.65□□□□□ -2.31
RPL39P62891 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.65□□□□□ -2.31
RPL39P62891 snoU13.26-201ENST00000459452 105 ntBASIC0.65□□□□□ -2.31
RPL39P62891 PABPC1P3-201ENST00000469174 459 ntBASIC0.65□□□□□ -2.31
RPL39P62891 AC087879.1-201ENST00000474343 374 ntBASIC0.65□□□□□ -2.31
RPL39P62891 AC110792.2-201ENST00000510278 224 ntBASIC0.65□□□□□ -2.31
RPL39P62891 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.65□□□□□ -2.31
RPL39P62891 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC0.65□□□□□ -2.31
RPL39P62891 RNU6-347P-201ENST00000516658 105 ntBASIC0.65□□□□□ -2.31
RPL39P62891 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC0.65□□□□□ -2.31
RPL39P62891 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.65□□□□□ -2.31
RPL39P62891 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.65□□□□□ -2.31
RPL39P62891 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.65□□□□□ -2.31
RPL39P62891 AC074029.2-201ENST00000551045 634 ntBASIC0.65□□□□□ -2.31
RPL39P62891 AC011611.5-201ENST00000552477 578 ntBASIC0.65□□□□□ -2.31
RPL39P62891 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC0.65□□□□□ -2.31
RPL39P62891 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC0.65□□□□□ -2.31
RPL39P62891 AC007229.1-201ENST00000590455 412 ntBASIC0.65□□□□□ -2.31
RPL39P62891 AC245128.3-201ENST00000594721 748 ntBASIC0.65□□□□□ -2.31
RPL39P62891 AL158827.2-201ENST00000602494 330 ntBASIC0.65□□□□□ -2.31
RPL39P62891 DUSP12P1-201ENST00000612874 516 ntBASIC0.65□□□□□ -2.31
RPL39P62891 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC0.65□□□□□ -2.31
RPL39P62891 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.65□□□□□ -2.31
RPL39P62891 AL691447.3-201ENST00000635020 330 ntBASIC0.65□□□□□ -2.31
RPL39P62891 AC241585.2-209ENST00000638217 143 ntBASIC0.65□□□□□ -2.31
RPL39P62891 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
RPL39P62891 MTND5P12-201ENST00000502851 1449 ntBASIC0.64□□□□□ -2.31
RPL39P62891 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
RPL39P62891 RNU6-939P-201ENST00000384634 107 ntBASIC0.64□□□□□ -2.31
RPL39P62891 MIR147B-201ENST00000390185 80 ntBASIC0.64□□□□□ -2.31
RPL39P62891 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC0.64□□□□□ -2.31
RPL39P62891 PIGPP2-201ENST00000411569 458 ntBASIC0.64□□□□□ -2.31
RPL39P62891 RPS12P24-201ENST00000412619 387 ntBASIC0.64□□□□□ -2.31
RPL39P62891 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC0.64□□□□□ -2.31
RPL39P62891 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC0.64□□□□□ -2.31
RPL39P62891 VN1R36P-201ENST00000414936 291 ntBASIC0.64□□□□□ -2.31
RPL39P62891 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC0.64□□□□□ -2.31
RPL39P62891 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms