Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 AC005592.1-201ENST00000566527 1640 ntBASIC4.79□□□□□ -1.64
ERVFC1P60507 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
ERVFC1P60507 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.79□□□□□ -1.64
ERVFC1P60507 LINC01355-201ENST00000566551 5444 ntBASIC4.79□□□□□ -1.64
ERVFC1P60507 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ERVFC1P60507 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ERVFC1P60507 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
ERVFC1P60507 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.79□□□□□ -1.64
ERVFC1P60507 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.79□□□□□ -1.64
ERVFC1P60507 MIR331-201ENST00000362302 94 ntBASIC4.79□□□□□ -1.64
ERVFC1P60507 RNU6-238P-201ENST00000363313 106 ntBASIC4.79□□□□□ -1.64
ERVFC1P60507 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ERVFC1P60507 AL359837.1-201ENST00000381357 287 ntBASIC4.79□□□□□ -1.64
ERVFC1P60507 RNU6-26P-201ENST00000383985 107 ntBASIC4.79□□□□□ -1.64
ERVFC1P60507 RNU6-146P-201ENST00000384602 108 ntBASIC4.79□□□□□ -1.64
ERVFC1P60507 Y_RNA.576-201ENST00000384781 102 ntBASIC4.79□□□□□ -1.64
ERVFC1P60507 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
ERVFC1P60507 AL022722.2-201ENST00000402519 180 ntBASIC4.79□□□□□ -1.64
ERVFC1P60507 RNU6-387P-201ENST00000411331 105 ntBASIC4.79□□□□□ -1.64
ERVFC1P60507 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.79□□□□□ -1.64
ERVFC1P60507 AL139095.3-201ENST00000419672 1203 ntBASIC4.79□□□□□ -1.64
ERVFC1P60507 DPH3P2-201ENST00000422618 250 ntBASIC4.79□□□□□ -1.64
ERVFC1P60507 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.79□□□□□ -1.64
ERVFC1P60507 RPL35AP21-201ENST00000437667 333 ntBASIC4.79□□□□□ -1.64
ERVFC1P60507 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.79□□□□□ -1.64
ERVFC1P60507 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.79□□□□□ -1.64
ERVFC1P60507 AL162388.1-201ENST00000450912 352 ntBASIC4.79□□□□□ -1.64
ERVFC1P60507 RN7SL817P-201ENST00000480777 288 ntBASIC4.79□□□□□ -1.64
ERVFC1P60507 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.79□□□□□ -1.64
ERVFC1P60507 HIGD1AP13-201ENST00000509878 289 ntBASIC4.79□□□□□ -1.64
ERVFC1P60507 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.79□□□□□ -1.64
ERVFC1P60507 Y_RNA.661-201ENST00000516003 99 ntBASIC4.79□□□□□ -1.64
ERVFC1P60507 Y_RNA.708-201ENST00000516950 96 ntBASIC4.79□□□□□ -1.64
ERVFC1P60507 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ERVFC1P60507 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.79□□□□□ -1.64
ERVFC1P60507 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ERVFC1P60507 PISRT1.1-201ENST00000616930 107 ntBASIC4.79□□□□□ -1.64
ERVFC1P60507 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ERVFC1P60507 AC000374.1-201ENST00000434698 1745 ntBASIC4.79□□□□□ -1.64
ERVFC1P60507 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ERVFC1P60507 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.79□□□□□ -1.64
ERVFC1P60507 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ERVFC1P60507 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
ERVFC1P60507 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
ERVFC1P60507 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
ERVFC1P60507 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ERVFC1P60507 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
ERVFC1P60507 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
ERVFC1P60507 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.78□□□□□ -1.64
ERVFC1P60507 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ERVFC1P60507 AL445487.1-201ENST00000415694 1580 ntBASIC4.78□□□□□ -1.64
ERVFC1P60507 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ERVFC1P60507 EIF2AP4-201ENST00000424793 1781 ntBASIC4.78□□□□□ -1.64
ERVFC1P60507 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.78□□□□□ -1.64
ERVFC1P60507 AC032011.1-201ENST00000611703 1549 ntBASIC4.78□□□□□ -1.64
ERVFC1P60507 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ERVFC1P60507 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ERVFC1P60507 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ERVFC1P60507 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ERVFC1P60507 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.78□□□□□ -1.64
ERVFC1P60507 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.78□□□□□ -1.64
ERVFC1P60507 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
ERVFC1P60507 AC011978.2-201ENST00000569835 2054 ntBASIC4.78□□□□□ -1.64
ERVFC1P60507 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ERVFC1P60507 RNU6-562P-201ENST00000362731 107 ntBASIC4.78□□□□□ -1.64
ERVFC1P60507 RNU6-1287P-201ENST00000362914 107 ntBASIC4.78□□□□□ -1.64
ERVFC1P60507 RNU6-960P-201ENST00000364056 120 ntBASIC4.78□□□□□ -1.64
ERVFC1P60507 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ERVFC1P60507 AC019155.1-201ENST00000382242 574 ntBASIC4.78□□□□□ -1.64
ERVFC1P60507 SNORA24.1-201ENST00000384401 135 ntBASIC4.78□□□□□ -1.64
ERVFC1P60507 RNU6-1060P-201ENST00000384664 107 ntBASIC4.78□□□□□ -1.64
ERVFC1P60507 MIR450B-201ENST00000401182 78 ntBASIC4.78□□□□□ -1.64
ERVFC1P60507 AL445189.1-201ENST00000405722 338 ntBASIC4.78□□□□□ -1.64
ERVFC1P60507 U3.35-201ENST00000408405 208 ntBASIC4.78□□□□□ -1.64
ERVFC1P60507 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ERVFC1P60507 RPL23AP38-201ENST00000423801 469 ntBASIC4.78□□□□□ -1.64
ERVFC1P60507 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.78□□□□□ -1.64
ERVFC1P60507 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.78□□□□□ -1.64
ERVFC1P60507 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.78□□□□□ -1.64
ERVFC1P60507 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.78□□□□□ -1.64
ERVFC1P60507 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.78□□□□□ -1.64
ERVFC1P60507 RNU6-470P-201ENST00000515954 104 ntBASIC4.78□□□□□ -1.64
ERVFC1P60507 RNU6-475P-201ENST00000516073 104 ntBASIC4.78□□□□□ -1.64
ERVFC1P60507 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.78□□□□□ -1.64
ERVFC1P60507 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.78□□□□□ -1.64
ERVFC1P60507 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.78□□□□□ -1.64
ERVFC1P60507 AL445363.3-201ENST00000623080 671 ntBASIC4.78□□□□□ -1.64
ERVFC1P60507 AC067931.1-201ENST00000624190 671 ntBASIC4.78□□□□□ -1.64
ERVFC1P60507 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.78□□□□□ -1.64
ERVFC1P60507 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
ERVFC1P60507 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.78□□□□□ -1.64
ERVFC1P60507 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
ERVFC1P60507 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.78□□□□□ -1.64
ERVFC1P60507 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.78□□□□□ -1.64
ERVFC1P60507 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ERVFC1P60507 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
ERVFC1P60507 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
ERVFC1P60507 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.77□□□□□ -1.65
ERVFC1P60507 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
ERVFC1P60507 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms