Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CDH11P55287 AC009812.4-201ENST00000569134 1805 ntBASIC3.19□□□□□ -1.9
CDH11P55287 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDH11P55287 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDH11P55287 GNG5P1-201ENST00000255500 204 ntBASIC3.19□□□□□ -1.9
CDH11P55287 OR5J1P-201ENST00000313544 939 ntBASIC3.19□□□□□ -1.9
CDH11P55287 RNU1-75P-201ENST00000347264 129 ntBASIC3.19□□□□□ -1.9
CDH11P55287 SNORA31-201ENST00000362607 130 ntBASIC3.19□□□□□ -1.9
CDH11P55287 RNA5SP51-201ENST00000364750 119 ntBASIC3.19□□□□□ -1.9
CDH11P55287 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDH11P55287 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH11P55287 RNU6-637P-201ENST00000384050 107 ntBASIC3.19□□□□□ -1.9
CDH11P55287 Y_RNA.505-201ENST00000384489 102 ntBASIC3.19□□□□□ -1.9
CDH11P55287 MIR218-2-201ENST00000385006 110 ntBASIC3.19□□□□□ -1.9
CDH11P55287 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDH11P55287 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDH11P55287 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH11P55287 AL136372.1-201ENST00000403060 228 ntBASIC3.19□□□□□ -1.9
CDH11P55287 RPS3AP24-201ENST00000407896 734 ntBASIC3.19□□□□□ -1.9
CDH11P55287 RNU2-43P-201ENST00000410306 190 ntBASIC3.19□□□□□ -1.9
CDH11P55287 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH11P55287 HMGB3P23-201ENST00000414981 585 ntBASIC3.19□□□□□ -1.9
CDH11P55287 AC093578.1-201ENST00000415219 368 ntBASIC3.19□□□□□ -1.9
CDH11P55287 SPA17P1-201ENST00000416656 452 ntBASIC3.19□□□□□ -1.9
CDH11P55287 MTCO3P12-201ENST00000416718 547 ntBASIC3.19□□□□□ -1.9
CDH11P55287 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH11P55287 CCDC58P2-201ENST00000417131 366 ntBASIC3.19□□□□□ -1.9
CDH11P55287 SYF2P2-201ENST00000417620 583 ntBASIC3.19□□□□□ -1.9
CDH11P55287 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH11P55287 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.19□□□□□ -1.9
CDH11P55287 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH11P55287 DNAJC19P4-201ENST00000440115 345 ntBASIC3.19□□□□□ -1.9
CDH11P55287 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH11P55287 MTCYBP1-201ENST00000454315 1119 ntBASIC3.19□□□□□ -1.9
CDH11P55287 RN7SL594P-201ENST00000470590 287 ntBASIC3.19□□□□□ -1.9
CDH11P55287 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH11P55287 RNU6-720P-201ENST00000516363 108 ntBASIC3.19□□□□□ -1.9
CDH11P55287 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.19□□□□□ -1.9
CDH11P55287 SNORA70.19-201ENST00000516717 90 ntBASIC3.19□□□□□ -1.9
CDH11P55287 SNORA18.6-201ENST00000516792 115 ntBASIC3.19□□□□□ -1.9
CDH11P55287 RNU6-798P-201ENST00000516912 103 ntBASIC3.19□□□□□ -1.9
CDH11P55287 SNORA31.22-201ENST00000517204 135 ntBASIC3.19□□□□□ -1.9
CDH11P55287 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH11P55287 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CDH11P55287 DEFB108D-201ENST00000527787 222 ntBASIC3.19□□□□□ -1.9
CDH11P55287 AP004242.1-201ENST00000533701 349 ntBASIC3.19□□□□□ -1.9
CDH11P55287 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH11P55287 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH11P55287 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.19□□□□□ -1.9
CDH11P55287 AC009063.1-201ENST00000563342 702 ntBASIC3.19□□□□□ -1.9
CDH11P55287 COX6CP3-201ENST00000580869 223 ntBASIC3.19□□□□□ -1.9
CDH11P55287 AC091805.2-201ENST00000603848 235 ntBASIC3.19□□□□□ -1.9
CDH11P55287 AL022099.1-201ENST00000604551 712 ntBASIC3.19□□□□□ -1.9
CDH11P55287 AC007038.2-201ENST00000608095 740 ntBASIC3.19□□□□□ -1.9
CDH11P55287 AL590282.1-201ENST00000610379 1136 ntBASIC3.19□□□□□ -1.9
CDH11P55287 AC245517.5-201ENST00000611529 162 ntBASIC3.19□□□□□ -1.9
CDH11P55287 AC087241.4-201ENST00000612441 480 ntBASIC3.19□□□□□ -1.9
CDH11P55287 AC093838.1-201ENST00000613014 469 ntBASIC3.19□□□□□ -1.9
CDH11P55287 uc_338.12-201ENST00000616344 181 ntBASIC3.19□□□□□ -1.9
CDH11P55287 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CDH11P55287 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.19□□□□□ -1.9
CDH11P55287 AL360181.4-201ENST00000621752 134 ntBASIC3.19□□□□□ -1.9
CDH11P55287 AC084035.1-201ENST00000634543 607 ntBASIC3.19□□□□□ -1.9
CDH11P55287 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH11P55287 AC119674.1-207ENST00000641355 633 ntBASIC3.19□□□□□ -1.9
CDH11P55287 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDH11P55287 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDH11P55287 MTCO1P12-201ENST00000414273 1543 ntBASIC3.19□□□□□ -1.9
CDH11P55287 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDH11P55287 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH11P55287 AC005183.1-201ENST00000603687 1979 ntBASIC3.18□□□□□ -1.9
CDH11P55287 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.18□□□□□ -1.9
CDH11P55287 RNU5A-8P-201ENST00000364102 114 ntBASIC3.18□□□□□ -1.9
CDH11P55287 RNA5SP387-201ENST00000364226 106 ntBASIC3.18□□□□□ -1.9
CDH11P55287 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.18□□□□□ -1.9
CDH11P55287 RPL7P60-201ENST00000397636 735 ntBASIC3.18□□□□□ -1.9
CDH11P55287 RNU6-516P-201ENST00000411381 104 ntBASIC3.18□□□□□ -1.9
CDH11P55287 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH11P55287 AC017079.2-201ENST00000416102 485 ntBASIC3.18□□□□□ -1.9
CDH11P55287 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.18□□□□□ -1.9
CDH11P55287 PPP1R11P2-201ENST00000423543 382 ntBASIC3.18□□□□□ -1.9
CDH11P55287 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.18□□□□□ -1.9
CDH11P55287 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH11P55287 MTATP6P4-201ENST00000427725 675 ntBASIC3.18□□□□□ -1.9
CDH11P55287 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.18□□□□□ -1.9
CDH11P55287 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH11P55287 RABEPKP1-201ENST00000440529 1026 ntBASIC3.18□□□□□ -1.9
CDH11P55287 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH11P55287 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH11P55287 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.18□□□□□ -1.9
CDH11P55287 MTND1P12-201ENST00000455231 147 ntBASIC3.18□□□□□ -1.9
CDH11P55287 SNORD105B-201ENST00000458770 79 ntBASIC3.18□□□□□ -1.9
CDH11P55287 AC023598.1-201ENST00000472521 361 ntBASIC3.18□□□□□ -1.9
CDH11P55287 AC106707.2-201ENST00000484182 374 ntBASIC3.18□□□□□ -1.9
CDH11P55287 AC091133.4-201ENST00000511142 308 ntBASIC3.18□□□□□ -1.9
CDH11P55287 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH11P55287 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.18□□□□□ -1.9
CDH11P55287 AP003033.1-201ENST00000527244 415 ntBASIC3.18□□□□□ -1.9
CDH11P55287 AP000857.1-201ENST00000532151 543 ntBASIC3.18□□□□□ -1.9
CDH11P55287 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms