Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.94□□□□□ -1.94
MSH6P52701 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.94□□□□□ -1.94
MSH6P52701 ZNF705CP-201ENST00000530515 889 ntBASIC2.94□□□□□ -1.94
MSH6P52701 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.94□□□□□ -1.94
MSH6P52701 AP003973.1-201ENST00000604639 691 ntBASIC2.94□□□□□ -1.94
MSH6P52701 AP002802.2-201ENST00000605877 235 ntBASIC2.94□□□□□ -1.94
MSH6P52701 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.94□□□□□ -1.94
MSH6P52701 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
MSH6P52701 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
MSH6P52701 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
MSH6P52701 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
MSH6P52701 AP001350.1-201ENST00000601906 1524 ntBASIC2.93□□□□□ -1.94
MSH6P52701 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.93□□□□□ -1.94
MSH6P52701 Y_RNA.116-201ENST00000363292 103 ntBASIC2.93□□□□□ -1.94
MSH6P52701 SNORA25.9-201ENST00000365087 128 ntBASIC2.93□□□□□ -1.94
MSH6P52701 AL023807.1-201ENST00000407932 359 ntBASIC2.93□□□□□ -1.94
MSH6P52701 RNU2-71P-201ENST00000411395 189 ntBASIC2.93□□□□□ -1.94
MSH6P52701 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
MSH6P52701 HMGB1P11-201ENST00000413899 637 ntBASIC2.93□□□□□ -1.94
MSH6P52701 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.93□□□□□ -1.94
MSH6P52701 RPS6P14-201ENST00000425165 719 ntBASIC2.93□□□□□ -1.94
MSH6P52701 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.93□□□□□ -1.94
MSH6P52701 NDUFA5P4-201ENST00000436704 385 ntBASIC2.93□□□□□ -1.94
MSH6P52701 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.93□□□□□ -1.94
MSH6P52701 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.93□□□□□ -1.94
MSH6P52701 SSXP4-201ENST00000451349 245 ntBASIC2.93□□□□□ -1.94
MSH6P52701 RPS24P6-201ENST00000452670 400 ntBASIC2.93□□□□□ -1.94
MSH6P52701 AC244505.3-201ENST00000454598 187 ntBASIC2.93□□□□□ -1.94
MSH6P52701 AC010301.1-201ENST00000473936 355 ntBASIC2.93□□□□□ -1.94
MSH6P52701 AC087190.1-201ENST00000484462 480 ntBASIC2.93□□□□□ -1.94
MSH6P52701 RNA5SP182-201ENST00000516064 82 ntBASIC2.93□□□□□ -1.94
MSH6P52701 AC023632.1-201ENST00000518463 375 ntBASIC2.93□□□□□ -1.94
MSH6P52701 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.93□□□□□ -1.94
MSH6P52701 AP004371.1-201ENST00000525240 214 ntBASIC2.93□□□□□ -1.94
MSH6P52701 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.93□□□□□ -1.94
MSH6P52701 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.93□□□□□ -1.94
MSH6P52701 AC110588.1-201ENST00000559699 137 ntBASIC2.93□□□□□ -1.94
MSH6P52701 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
MSH6P52701 AP001542.2-201ENST00000593141 364 ntBASIC2.93□□□□□ -1.94
MSH6P52701 AL359821.1-201ENST00000605519 182 ntBASIC2.93□□□□□ -1.94
MSH6P52701 AC099785.1-201ENST00000605697 437 ntBASIC2.93□□□□□ -1.94
MSH6P52701 AL137847.3-201ENST00000611521 109 ntBASIC2.93□□□□□ -1.94
MSH6P52701 AC108479.2-201ENST00000617314 601 ntBASIC2.93□□□□□ -1.94
MSH6P52701 AC073968.1-201ENST00000618594 637 ntBASIC2.93□□□□□ -1.94
MSH6P52701 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.93□□□□□ -1.94
MSH6P52701 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.93□□□□□ -1.94
MSH6P52701 SNORA48.3-201ENST00000391081 134 ntBASIC2.92□□□□□ -1.94
MSH6P52701 AL133264.1-201ENST00000407157 562 ntBASIC2.92□□□□□ -1.94
MSH6P52701 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.92□□□□□ -1.94
MSH6P52701 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.92□□□□□ -1.94
MSH6P52701 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.92□□□□□ -1.94
MSH6P52701 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.92□□□□□ -1.94
MSH6P52701 COX6CP18-201ENST00000448769 222 ntBASIC2.92□□□□□ -1.94
MSH6P52701 VPS26AP1-201ENST00000483197 979 ntBASIC2.92□□□□□ -1.94
MSH6P52701 AC104629.1-201ENST00000494226 508 ntBASIC2.92□□□□□ -1.94
MSH6P52701 RPL23AP55-201ENST00000498163 452 ntBASIC2.92□□□□□ -1.94
MSH6P52701 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.92□□□□□ -1.94
MSH6P52701 AC104417.1-201ENST00000523974 751 ntBASIC2.92□□□□□ -1.94
MSH6P52701 AC109635.4-202ENST00000531666 412 ntBASIC2.92□□□□□ -1.94
MSH6P52701 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.92□□□□□ -1.94
MSH6P52701 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.92□□□□□ -1.94
MSH6P52701 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.92□□□□□ -1.94
MSH6P52701 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.92□□□□□ -1.94
MSH6P52701 AC068620.3-201ENST00000602749 560 ntBASIC2.92□□□□□ -1.94
MSH6P52701 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.92□□□□□ -1.94
MSH6P52701 AC007275.1-201ENST00000621243 671 ntBASIC2.92□□□□□ -1.94
MSH6P52701 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.92□□□□□ -1.94
MSH6P52701 AC093591.3-201ENST00000634516 308 ntBASIC2.92□□□□□ -1.94
MSH6P52701 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.92□□□□□ -1.94
MSH6P52701 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
MSH6P52701 AC103988.1-201ENST00000566382 2177 ntBASIC2.91□□□□□ -1.94
MSH6P52701 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.91□□□□□ -1.94
MSH6P52701 RNA5SP258-201ENST00000362750 119 ntBASIC2.91□□□□□ -1.94
MSH6P52701 RNU6-457P-201ENST00000363999 107 ntBASIC2.91□□□□□ -1.94
MSH6P52701 SNORA51.6-201ENST00000384151 125 ntBASIC2.91□□□□□ -1.94
MSH6P52701 AL603865.2-201ENST00000401679 213 ntBASIC2.91□□□□□ -1.94
MSH6P52701 RPL7P27-201ENST00000403775 720 ntBASIC2.91□□□□□ -1.94
MSH6P52701 AL136133.1-201ENST00000413694 376 ntBASIC2.91□□□□□ -1.94
MSH6P52701 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.91□□□□□ -1.94
MSH6P52701 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.91□□□□□ -1.94
MSH6P52701 AL035410.1-201ENST00000427409 427 ntBASIC2.91□□□□□ -1.94
MSH6P52701 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.91□□□□□ -1.94
MSH6P52701 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.91□□□□□ -1.94
MSH6P52701 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.91□□□□□ -1.94
MSH6P52701 AC009961.3-201ENST00000449832 765 ntBASIC2.91□□□□□ -1.94
MSH6P52701 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.91□□□□□ -1.94
MSH6P52701 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.91□□□□□ -1.94
MSH6P52701 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.91□□□□□ -1.94
MSH6P52701 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.91□□□□□ -1.94
MSH6P52701 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.91□□□□□ -1.94
MSH6P52701 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.91□□□□□ -1.94
MSH6P52701 SULT1C2P1-202ENST00000562418 459 ntBASIC2.91□□□□□ -1.94
MSH6P52701 AC122134.1-202ENST00000569111 1201 ntBASIC2.91□□□□□ -1.94
MSH6P52701 AC126365.2-201ENST00000580630 379 ntBASIC2.91□□□□□ -1.94
MSH6P52701 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.91□□□□□ -1.94
MSH6P52701 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.91□□□□□ -1.94
MSH6P52701 AL109653.1-201ENST00000603091 248 ntBASIC2.91□□□□□ -1.94
MSH6P52701 AL590282.1-201ENST00000610379 1136 ntBASIC2.91□□□□□ -1.94
MSH6P52701 MTND2P41-201ENST00000637599 773 ntBASIC2.91□□□□□ -1.94
MSH6P52701 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms