Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.77□□□□□ -2.13
GTF2A1P52655 MIR5089-201ENST00000580047 84 ntBASIC1.77□□□□□ -2.13
GTF2A1P52655 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.77□□□□□ -2.13
GTF2A1P52655 AL390838.2-201ENST00000602394 274 ntBASIC1.77□□□□□ -2.13
GTF2A1P52655 AC012443.1-201ENST00000605605 231 ntBASIC1.77□□□□□ -2.13
GTF2A1P52655 AP000254.1-201ENST00000609934 520 ntBASIC1.77□□□□□ -2.13
GTF2A1P52655 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.77□□□□□ -2.13
GTF2A1P52655 Y_RNA.783-201ENST00000613546 102 ntBASIC1.77□□□□□ -2.13
GTF2A1P52655 AC012150.2-201ENST00000621300 544 ntBASIC1.77□□□□□ -2.13
GTF2A1P52655 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.77□□□□□ -2.13
GTF2A1P52655 U6.107-201ENST00000637108 79 ntBASIC1.77□□□□□ -2.13
GTF2A1P52655 AC008568.2-201ENST00000623862 2313 ntBASIC1.76□□□□□ -2.13
GTF2A1P52655 MIR421-201ENST00000365696 85 ntBASIC1.76□□□□□ -2.13
GTF2A1P52655 AL023284.1-201ENST00000403956 276 ntBASIC1.76□□□□□ -2.13
GTF2A1P52655 UBE2V1P9-201ENST00000414760 368 ntBASIC1.76□□□□□ -2.13
GTF2A1P52655 AL009174.1-201ENST00000426577 416 ntBASIC1.76□□□□□ -2.13
GTF2A1P52655 FABP5P3-201ENST00000437960 408 ntBASIC1.76□□□□□ -2.13
GTF2A1P52655 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.76□□□□□ -2.13
GTF2A1P52655 HMGN1P5-201ENST00000448591 263 ntBASIC1.76□□□□□ -2.13
GTF2A1P52655 RPL21P99-201ENST00000480369 423 ntBASIC1.76□□□□□ -2.13
GTF2A1P52655 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.76□□□□□ -2.13
GTF2A1P52655 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.76□□□□□ -2.13
GTF2A1P52655 RNU6-488P-201ENST00000515918 99 ntBASIC1.76□□□□□ -2.13
GTF2A1P52655 SCARNA17.1-201ENST00000516211 143 ntBASIC1.76□□□□□ -2.13
GTF2A1P52655 SCARNA17.2-201ENST00000516334 143 ntBASIC1.76□□□□□ -2.13
GTF2A1P52655 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.76□□□□□ -2.13
GTF2A1P52655 EEF1A1P37-201ENST00000522748 715 ntBASIC1.76□□□□□ -2.13
GTF2A1P52655 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.76□□□□□ -2.13
GTF2A1P52655 OR4P1P-201ENST00000530808 1136 ntBASIC1.76□□□□□ -2.13
GTF2A1P52655 OR5AL2P-201ENST00000532185 920 ntBASIC1.76□□□□□ -2.13
GTF2A1P52655 SNRPGP18-201ENST00000553000 214 ntBASIC1.76□□□□□ -2.13
GTF2A1P52655 AL354943.1-201ENST00000572103 781 ntBASIC1.76□□□□□ -2.13
GTF2A1P52655 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.76□□□□□ -2.13
GTF2A1P52655 AC025588.2-201ENST00000604851 466 ntBASIC1.76□□□□□ -2.13
GTF2A1P52655 AC026790.2-201ENST00000606282 430 ntBASIC1.76□□□□□ -2.13
GTF2A1P52655 SCARNA17.4-201ENST00000614296 143 ntBASIC1.76□□□□□ -2.13
GTF2A1P52655 AC018926.3-201ENST00000618841 406 ntBASIC1.76□□□□□ -2.13
GTF2A1P52655 AL356266.1-201ENST00000623311 483 ntBASIC1.76□□□□□ -2.13
GTF2A1P52655 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.76□□□□□ -2.13
GTF2A1P52655 AL356118.1-201ENST00000635272 1078 ntBASIC1.76□□□□□ -2.13
GTF2A1P52655 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
GTF2A1P52655 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
GTF2A1P52655 RNU4-23P-201ENST00000362839 140 ntBASIC1.75□□□□□ -2.13
GTF2A1P52655 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
GTF2A1P52655 CISD1P1-201ENST00000393907 327 ntBASIC1.75□□□□□ -2.13
GTF2A1P52655 AL033519.2-201ENST00000403958 392 ntBASIC1.75□□□□□ -2.13
GTF2A1P52655 AL024474.1-201ENST00000404655 591 ntBASIC1.75□□□□□ -2.13
GTF2A1P52655 NDUFB4P4-201ENST00000404822 243 ntBASIC1.75□□□□□ -2.13
GTF2A1P52655 RNU6-955P-201ENST00000410497 104 ntBASIC1.75□□□□□ -2.13
GTF2A1P52655 AC092745.2-202ENST00000411880 369 ntBASIC1.75□□□□□ -2.13
GTF2A1P52655 AC012497.1-201ENST00000429392 575 ntBASIC1.75□□□□□ -2.13
GTF2A1P52655 AC010881.1-201ENST00000433830 235 ntBASIC1.75□□□□□ -2.13
GTF2A1P52655 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.75□□□□□ -2.13
GTF2A1P52655 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.75□□□□□ -2.13
GTF2A1P52655 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
GTF2A1P52655 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.75□□□□□ -2.13
GTF2A1P52655 Z82190.1-201ENST00000454534 490 ntBASIC1.75□□□□□ -2.13
GTF2A1P52655 RNU1-98P-201ENST00000458992 160 ntBASIC1.75□□□□□ -2.13
GTF2A1P52655 MTAPP1-201ENST00000489154 819 ntBASIC1.75□□□□□ -2.13
GTF2A1P52655 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.75□□□□□ -2.13
GTF2A1P52655 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.75□□□□□ -2.13
GTF2A1P52655 SNORA31.13-201ENST00000516624 135 ntBASIC1.75□□□□□ -2.13
GTF2A1P52655 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.75□□□□□ -2.13
GTF2A1P52655 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.75□□□□□ -2.13
GTF2A1P52655 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.75□□□□□ -2.13
GTF2A1P52655 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.75□□□□□ -2.13
GTF2A1P52655 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.75□□□□□ -2.13
GTF2A1P52655 MIR3618-201ENST00000580330 88 ntBASIC1.75□□□□□ -2.13
GTF2A1P52655 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
GTF2A1P52655 AP001521.1-201ENST00000609150 300 ntBASIC1.75□□□□□ -2.13
GTF2A1P52655 CR589904.2-201ENST00000612533 440 ntBASIC1.75□□□□□ -2.13
GTF2A1P52655 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
GTF2A1P52655 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
GTF2A1P52655 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
GTF2A1P52655 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
GTF2A1P52655 SNORA51.12-201ENST00000384448 134 ntBASIC1.74□□□□□ -2.13
GTF2A1P52655 RNU6-441P-201ENST00000384545 106 ntBASIC1.74□□□□□ -2.13
GTF2A1P52655 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
GTF2A1P52655 RNU6-272P-201ENST00000411028 104 ntBASIC1.74□□□□□ -2.13
GTF2A1P52655 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.74□□□□□ -2.13
GTF2A1P52655 CYCSP48-201ENST00000417124 323 ntBASIC1.74□□□□□ -2.13
GTF2A1P52655 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.74□□□□□ -2.13
GTF2A1P52655 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.74□□□□□ -2.13
GTF2A1P52655 UBE2V1P5-201ENST00000440070 405 ntBASIC1.74□□□□□ -2.13
GTF2A1P52655 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.74□□□□□ -2.13
GTF2A1P52655 RPS26P30-201ENST00000443431 335 ntBASIC1.74□□□□□ -2.13
GTF2A1P52655 AL357134.1-201ENST00000445848 426 ntBASIC1.74□□□□□ -2.13
GTF2A1P52655 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.74□□□□□ -2.13
GTF2A1P52655 HSPE1P24-201ENST00000450782 238 ntBASIC1.74□□□□□ -2.13
GTF2A1P52655 RPL12P25-201ENST00000455592 494 ntBASIC1.74□□□□□ -2.13
GTF2A1P52655 DYNLL1P5-201ENST00000467158 270 ntBASIC1.74□□□□□ -2.13
GTF2A1P52655 RPL30P5-201ENST00000494923 336 ntBASIC1.74□□□□□ -2.13
GTF2A1P52655 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.74□□□□□ -2.13
GTF2A1P52655 AC114781.4-201ENST00000513707 639 ntBASIC1.74□□□□□ -2.13
GTF2A1P52655 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.74□□□□□ -2.13
GTF2A1P52655 RNU6-798P-201ENST00000516912 103 ntBASIC1.74□□□□□ -2.13
GTF2A1P52655 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.74□□□□□ -2.13
GTF2A1P52655 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.74□□□□□ -2.13
GTF2A1P52655 AL022099.1-201ENST00000604551 712 ntBASIC1.74□□□□□ -2.13
GTF2A1P52655 AC055876.5-201ENST00000605667 259 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms