Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 MIR4504-201ENST00000577413 92 ntBASIC4.69□□□□□ -1.66
MRE11P49959 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.69□□□□□ -1.66
MRE11P49959 AC005498.1-201ENST00000592125 465 ntBASIC4.69□□□□□ -1.66
MRE11P49959 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.69□□□□□ -1.66
MRE11P49959 RPL23AP92-201ENST00000603609 255 ntBASIC4.69□□□□□ -1.66
MRE11P49959 AL391261.4-201ENST00000616012 481 ntBASIC4.69□□□□□ -1.66
MRE11P49959 AL356585.4-201ENST00000623078 1229 ntBASIC4.69□□□□□ -1.66
MRE11P49959 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.69□□□□□ -1.66
MRE11P49959 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
MRE11P49959 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
MRE11P49959 AC233263.6-201ENST00000631132 1963 ntBASIC4.69□□□□□ -1.66
MRE11P49959 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
MRE11P49959 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
MRE11P49959 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
MRE11P49959 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.68□□□□□ -1.66
MRE11P49959 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.68□□□□□ -1.66
MRE11P49959 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
MRE11P49959 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
MRE11P49959 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
MRE11P49959 RN7SKP44-201ENST00000363602 316 ntBASIC4.68□□□□□ -1.66
MRE11P49959 Y_RNA.166-201ENST00000363730 102 ntBASIC4.68□□□□□ -1.66
MRE11P49959 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
MRE11P49959 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
MRE11P49959 RNU6-373P-201ENST00000411247 98 ntBASIC4.68□□□□□ -1.66
MRE11P49959 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.68□□□□□ -1.66
MRE11P49959 AL139095.3-201ENST00000419672 1203 ntBASIC4.68□□□□□ -1.66
MRE11P49959 AC006548.1-201ENST00000427470 102 ntBASIC4.68□□□□□ -1.66
MRE11P49959 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.68□□□□□ -1.66
MRE11P49959 CYCSP32-201ENST00000440548 321 ntBASIC4.68□□□□□ -1.66
MRE11P49959 BNIP3P2-201ENST00000441221 577 ntBASIC4.68□□□□□ -1.66
MRE11P49959 NDUFS5P3-201ENST00000450668 321 ntBASIC4.68□□□□□ -1.66
MRE11P49959 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.68□□□□□ -1.66
MRE11P49959 AC104073.1-201ENST00000451988 151 ntBASIC4.68□□□□□ -1.66
MRE11P49959 AL136126.1-201ENST00000473603 402 ntBASIC4.68□□□□□ -1.66
MRE11P49959 AC093278.1-201ENST00000494700 600 ntBASIC4.68□□□□□ -1.66
MRE11P49959 RNA5SP401-201ENST00000515920 127 ntBASIC4.68□□□□□ -1.66
MRE11P49959 AC090572.1-201ENST00000519251 160 ntBASIC4.68□□□□□ -1.66
MRE11P49959 AC090136.1-201ENST00000520009 240 ntBASIC4.68□□□□□ -1.66
MRE11P49959 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.68□□□□□ -1.66
MRE11P49959 AC093027.1-201ENST00000546698 429 ntBASIC4.68□□□□□ -1.66
MRE11P49959 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.68□□□□□ -1.66
MRE11P49959 RN7SL703P-201ENST00000578485 302 ntBASIC4.68□□□□□ -1.66
MRE11P49959 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.68□□□□□ -1.66
MRE11P49959 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.68□□□□□ -1.66
MRE11P49959 VN1R80P-201ENST00000597126 338 ntBASIC4.68□□□□□ -1.66
MRE11P49959 Z84480.1-201ENST00000605131 311 ntBASIC4.68□□□□□ -1.66
MRE11P49959 AL050343.2-201ENST00000607338 280 ntBASIC4.68□□□□□ -1.66
MRE11P49959 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
MRE11P49959 CR381572.1-201ENST00000625098 102 ntBASIC4.68□□□□□ -1.66
MRE11P49959 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
MRE11P49959 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
MRE11P49959 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
MRE11P49959 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.68□□□□□ -1.66
MRE11P49959 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.68□□□□□ -1.66
MRE11P49959 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
MRE11P49959 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.67□□□□□ -1.66
MRE11P49959 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
MRE11P49959 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.67□□□□□ -1.66
MRE11P49959 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.67□□□□□ -1.66
MRE11P49959 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
MRE11P49959 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
MRE11P49959 RNA5SP391-201ENST00000363456 119 ntBASIC4.67□□□□□ -1.66
MRE11P49959 RNU6-1097P-201ENST00000363586 107 ntBASIC4.67□□□□□ -1.66
MRE11P49959 RNY4P16-201ENST00000364768 94 ntBASIC4.67□□□□□ -1.66
MRE11P49959 U3.15-201ENST00000365398 212 ntBASIC4.67□□□□□ -1.66
MRE11P49959 RNU6-1226P-201ENST00000384317 107 ntBASIC4.67□□□□□ -1.66
MRE11P49959 PTMAP5-201ENST00000393073 333 ntBASIC4.67□□□□□ -1.66
MRE11P49959 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
MRE11P49959 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.67□□□□□ -1.66
MRE11P49959 RNU2-9P-201ENST00000410194 145 ntBASIC4.67□□□□□ -1.66
MRE11P49959 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.67□□□□□ -1.66
MRE11P49959 RPL31P45-201ENST00000419532 356 ntBASIC4.67□□□□□ -1.66
MRE11P49959 RPL21P109-201ENST00000422213 475 ntBASIC4.67□□□□□ -1.66
MRE11P49959 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.67□□□□□ -1.66
MRE11P49959 AL590233.1-201ENST00000430017 456 ntBASIC4.67□□□□□ -1.66
MRE11P49959 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.67□□□□□ -1.66
MRE11P49959 RPL23AP30-201ENST00000432419 501 ntBASIC4.67□□□□□ -1.66
MRE11P49959 RPL36AP53-201ENST00000432891 316 ntBASIC4.67□□□□□ -1.66
MRE11P49959 GPR143P-201ENST00000434155 205 ntBASIC4.67□□□□□ -1.66
MRE11P49959 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.67□□□□□ -1.66
MRE11P49959 AC105402.2-201ENST00000438503 358 ntBASIC4.67□□□□□ -1.66
MRE11P49959 CBWD4P-201ENST00000445695 655 ntBASIC4.67□□□□□ -1.66
MRE11P49959 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.67□□□□□ -1.66
MRE11P49959 AC140076.1-201ENST00000449897 361 ntBASIC4.67□□□□□ -1.66
MRE11P49959 HMGB1P15-201ENST00000453854 435 ntBASIC4.67□□□□□ -1.66
MRE11P49959 RN7SL98P-201ENST00000462271 300 ntBASIC4.67□□□□□ -1.66
MRE11P49959 MTCO2P29-201ENST00000465212 189 ntBASIC4.67□□□□□ -1.66
MRE11P49959 RPS3AP50-201ENST00000487064 803 ntBASIC4.67□□□□□ -1.66
MRE11P49959 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.67□□□□□ -1.66
MRE11P49959 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.67□□□□□ -1.66
MRE11P49959 PCBP2P3-201ENST00000509726 843 ntBASIC4.67□□□□□ -1.66
MRE11P49959 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.67□□□□□ -1.66
MRE11P49959 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.67□□□□□ -1.66
MRE11P49959 RN7SKP289-201ENST00000517244 295 ntBASIC4.67□□□□□ -1.66
MRE11P49959 OR5B19P-201ENST00000531766 928 ntBASIC4.67□□□□□ -1.66
MRE11P49959 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.67□□□□□ -1.66
MRE11P49959 AC243972.3-201ENST00000539655 198 ntBASIC4.67□□□□□ -1.66
MRE11P49959 AC135001.1-201ENST00000544546 283 ntBASIC4.67□□□□□ -1.66
MRE11P49959 AL442663.2-201ENST00000554385 511 ntBASIC4.67□□□□□ -1.66
MRE11P49959 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms