Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 LARP1BP2-201ENST00000486594 519 ntBASIC2.53□□□□□ -2
RFX3P48380 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.53□□□□□ -2
RFX3P48380 AIG1P1-201ENST00000503376 148 ntBASIC2.53□□□□□ -2
RFX3P48380 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.53□□□□□ -2
RFX3P48380 AC026801.2-201ENST00000515352 425 ntBASIC2.53□□□□□ -2
RFX3P48380 RNU6-1256P-201ENST00000516539 103 ntBASIC2.53□□□□□ -2
RFX3P48380 COX6CP8-201ENST00000522620 226 ntBASIC2.53□□□□□ -2
RFX3P48380 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.53□□□□□ -2
RFX3P48380 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.53□□□□□ -2
RFX3P48380 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.53□□□□□ -2
RFX3P48380 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.53□□□□□ -2
RFX3P48380 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.53□□□□□ -2
RFX3P48380 MIR7106-201ENST00000612419 65 ntBASIC2.53□□□□□ -2
RFX3P48380 MIR6130-201ENST00000619419 109 ntBASIC2.53□□□□□ -2
RFX3P48380 AC099654.8-201ENST00000637757 681 ntBASIC2.53□□□□□ -2
RFX3P48380 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.53□□□□□ -2
RFX3P48380 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.53□□□□□ -2
RFX3P48380 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2.01
RFX3P48380 AC005832.2-201ENST00000538921 1430 ntBASIC2.52□□□□□ -2.01
RFX3P48380 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RFX3P48380 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RFX3P48380 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.52□□□□□ -2.01
RFX3P48380 AC008669.1-201ENST00000565823 2178 ntBASIC2.52□□□□□ -2.01
RFX3P48380 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RFX3P48380 RNU5E-8P-201ENST00000363502 116 ntBASIC2.52□□□□□ -2.01
RFX3P48380 RNU1-112P-201ENST00000364401 164 ntBASIC2.52□□□□□ -2.01
RFX3P48380 Y_RNA.472-201ENST00000384322 102 ntBASIC2.52□□□□□ -2.01
RFX3P48380 Y_RNA.500-201ENST00000384466 111 ntBASIC2.52□□□□□ -2.01
RFX3P48380 AL138827.1-201ENST00000402666 306 ntBASIC2.52□□□□□ -2.01
RFX3P48380 AL122016.1-201ENST00000403365 367 ntBASIC2.52□□□□□ -2.01
RFX3P48380 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RFX3P48380 TPMTP2-201ENST00000414372 726 ntBASIC2.52□□□□□ -2.01
RFX3P48380 Z85995.1-201ENST00000415547 335 ntBASIC2.52□□□□□ -2.01
RFX3P48380 RPL7L1P10-201ENST00000427790 463 ntBASIC2.52□□□□□ -2.01
RFX3P48380 OR4K11P-201ENST00000431829 904 ntBASIC2.52□□□□□ -2.01
RFX3P48380 MTCYBP3-201ENST00000445588 1137 ntBASIC2.52□□□□□ -2.01
RFX3P48380 MRPL50P4-201ENST00000446432 475 ntBASIC2.52□□□□□ -2.01
RFX3P48380 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.52□□□□□ -2.01
RFX3P48380 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.52□□□□□ -2.01
RFX3P48380 AC097493.1-201ENST00000463958 372 ntBASIC2.52□□□□□ -2.01
RFX3P48380 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.52□□□□□ -2.01
RFX3P48380 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.52□□□□□ -2.01
RFX3P48380 XKRY-201ENST00000510392 1100 ntBASIC2.52□□□□□ -2.01
RFX3P48380 AC008837.2-201ENST00000513076 418 ntBASIC2.52□□□□□ -2.01
RFX3P48380 RNA5SP367-201ENST00000516557 118 ntBASIC2.52□□□□□ -2.01
RFX3P48380 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.52□□□□□ -2.01
RFX3P48380 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.52□□□□□ -2.01
RFX3P48380 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.52□□□□□ -2.01
RFX3P48380 AL132857.1-201ENST00000555180 708 ntBASIC2.52□□□□□ -2.01
RFX3P48380 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.52□□□□□ -2.01
RFX3P48380 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.52□□□□□ -2.01
RFX3P48380 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.52□□□□□ -2.01
RFX3P48380 OR4K7P-201ENST00000580232 945 ntBASIC2.52□□□□□ -2.01
RFX3P48380 VN1R90P-201ENST00000595717 726 ntBASIC2.52□□□□□ -2.01
RFX3P48380 AC008277.2-201ENST00000605196 797 ntBASIC2.52□□□□□ -2.01
RFX3P48380 AC007619.2-201ENST00000605743 379 ntBASIC2.52□□□□□ -2.01
RFX3P48380 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RFX3P48380 AC109809.1-201ENST00000619665 545 ntBASIC2.52□□□□□ -2.01
RFX3P48380 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.52□□□□□ -2.01
RFX3P48380 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.52□□□□□ -2.01
RFX3P48380 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RFX3P48380 AC026241.1-201ENST00000517873 2142 ntBASIC2.51□□□□□ -2.01
RFX3P48380 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
RFX3P48380 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
RFX3P48380 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RFX3P48380 VTRNA1-1-201ENST00000363120 99 ntBASIC2.51□□□□□ -2.01
RFX3P48380 SNORA80A-201ENST00000363922 136 ntBASIC2.51□□□□□ -2.01
RFX3P48380 RNU6-621P-201ENST00000364752 109 ntBASIC2.51□□□□□ -2.01
RFX3P48380 AL356867.1-201ENST00000429623 299 ntBASIC2.51□□□□□ -2.01
RFX3P48380 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.51□□□□□ -2.01
RFX3P48380 AC236972.1-201ENST00000433225 199 ntBASIC2.51□□□□□ -2.01
RFX3P48380 NANOGP2-201ENST00000435391 727 ntBASIC2.51□□□□□ -2.01
RFX3P48380 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.51□□□□□ -2.01
RFX3P48380 RPL23AP76-201ENST00000441860 458 ntBASIC2.51□□□□□ -2.01
RFX3P48380 DDX3P2-201ENST00000446138 111 ntBASIC2.51□□□□□ -2.01
RFX3P48380 ST13P20-201ENST00000447996 1065 ntBASIC2.51□□□□□ -2.01
RFX3P48380 AL031313.1-201ENST00000448435 256 ntBASIC2.51□□□□□ -2.01
RFX3P48380 AP000705.1-201ENST00000454567 350 ntBASIC2.51□□□□□ -2.01
RFX3P48380 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RFX3P48380 AC090525.1-201ENST00000479116 478 ntBASIC2.51□□□□□ -2.01
RFX3P48380 RPL23AP70-201ENST00000483361 460 ntBASIC2.51□□□□□ -2.01
RFX3P48380 MTATP6P9-201ENST00000515039 680 ntBASIC2.51□□□□□ -2.01
RFX3P48380 SCARNA15.2-201ENST00000516409 127 ntBASIC2.51□□□□□ -2.01
RFX3P48380 RNU6-1282P-201ENST00000516735 96 ntBASIC2.51□□□□□ -2.01
RFX3P48380 AC021451.1-201ENST00000523498 1129 ntBASIC2.51□□□□□ -2.01
RFX3P48380 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.51□□□□□ -2.01
RFX3P48380 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.51□□□□□ -2.01
RFX3P48380 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RFX3P48380 AC079600.2-201ENST00000550076 130 ntBASIC2.51□□□□□ -2.01
RFX3P48380 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.51□□□□□ -2.01
RFX3P48380 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.51□□□□□ -2.01
RFX3P48380 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RFX3P48380 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.51□□□□□ -2.01
RFX3P48380 MIR4635-201ENST00000583759 79 ntBASIC2.51□□□□□ -2.01
RFX3P48380 AL035413.2-201ENST00000604801 525 ntBASIC2.51□□□□□ -2.01
RFX3P48380 AL158211.4-201ENST00000606988 584 ntBASIC2.51□□□□□ -2.01
RFX3P48380 AL161734.1-201ENST00000609720 557 ntBASIC2.51□□□□□ -2.01
RFX3P48380 AL109620.1-201ENST00000618738 1197 ntBASIC2.51□□□□□ -2.01
RFX3P48380 UCA1.1-201ENST00000620952 75 ntBASIC2.51□□□□□ -2.01
RFX3P48380 AC002550.2-201ENST00000621246 394 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms