Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 SNORA67.4-201ENST00000384688 142 ntBASIC2.23□□□□□ -2.05
RPA3P35244 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RPA3P35244 AC099548.1-201ENST00000421443 426 ntBASIC2.23□□□□□ -2.05
RPA3P35244 AC019178.2-201ENST00000423595 505 ntBASIC2.23□□□□□ -2.05
RPA3P35244 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RPA3P35244 AL158053.1-201ENST00000441503 453 ntBASIC2.23□□□□□ -2.05
RPA3P35244 AC005297.2-201ENST00000450430 606 ntBASIC2.23□□□□□ -2.05
RPA3P35244 AL353691.1-201ENST00000451332 387 ntBASIC2.23□□□□□ -2.05
RPA3P35244 AC008379.1-201ENST00000463655 464 ntBASIC2.23□□□□□ -2.05
RPA3P35244 MTND4LP3-201ENST00000468320 276 ntBASIC2.23□□□□□ -2.05
RPA3P35244 OR4G11P-201ENST00000492842 939 ntBASIC2.23□□□□□ -2.05
RPA3P35244 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.23□□□□□ -2.05
RPA3P35244 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.23□□□□□ -2.05
RPA3P35244 MRPS36P2-201ENST00000512569 299 ntBASIC2.23□□□□□ -2.05
RPA3P35244 RNA5SP281-201ENST00000516504 135 ntBASIC2.23□□□□□ -2.05
RPA3P35244 MTCYBP20-201ENST00000524239 1129 ntBASIC2.23□□□□□ -2.05
RPA3P35244 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.23□□□□□ -2.05
RPA3P35244 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.23□□□□□ -2.05
RPA3P35244 MIR4435-1-201ENST00000582552 80 ntBASIC2.23□□□□□ -2.05
RPA3P35244 MIR5002-201ENST00000584713 97 ntBASIC2.23□□□□□ -2.05
RPA3P35244 AC090330.1-201ENST00000588646 764 ntBASIC2.23□□□□□ -2.05
RPA3P35244 AP001542.2-201ENST00000593141 364 ntBASIC2.23□□□□□ -2.05
RPA3P35244 BNIP3P24-201ENST00000593398 557 ntBASIC2.23□□□□□ -2.05
RPA3P35244 DUXAP11-201ENST00000603858 526 ntBASIC2.23□□□□□ -2.05
RPA3P35244 DUXAP10-204ENST00000612052 616 ntBASIC2.23□□□□□ -2.05
RPA3P35244 AC004852.3-201ENST00000614131 326 ntBASIC2.23□□□□□ -2.05
RPA3P35244 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
RPA3P35244 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RPA3P35244 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RPA3P35244 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
RPA3P35244 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RPA3P35244 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
RPA3P35244 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RPA3P35244 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RPA3P35244 AL589826.1-201ENST00000340697 249 ntBASIC2.22□□□□□ -2.05
RPA3P35244 RNU5A-1-201ENST00000362698 116 ntBASIC2.22□□□□□ -2.05
RPA3P35244 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RPA3P35244 SNORA51.11-201ENST00000384442 131 ntBASIC2.22□□□□□ -2.05
RPA3P35244 MIR144-201ENST00000384886 86 ntBASIC2.22□□□□□ -2.05
RPA3P35244 U3.20-201ENST00000390909 217 ntBASIC2.22□□□□□ -2.05
RPA3P35244 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.22□□□□□ -2.05
RPA3P35244 AC027644.1-201ENST00000419595 298 ntBASIC2.22□□□□□ -2.05
RPA3P35244 AC007742.1-201ENST00000425789 329 ntBASIC2.22□□□□□ -2.05
RPA3P35244 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.22□□□□□ -2.05
RPA3P35244 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.22□□□□□ -2.05
RPA3P35244 AL512844.2-201ENST00000433990 593 ntBASIC2.22□□□□□ -2.05
RPA3P35244 ELOCP26-201ENST00000436067 329 ntBASIC2.22□□□□□ -2.05
RPA3P35244 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.22□□□□□ -2.05
RPA3P35244 AL049874.1-201ENST00000489560 388 ntBASIC2.22□□□□□ -2.05
RPA3P35244 AC090255.1-201ENST00000495779 349 ntBASIC2.22□□□□□ -2.05
RPA3P35244 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.22□□□□□ -2.05
RPA3P35244 AC010460.2-201ENST00000509054 677 ntBASIC2.22□□□□□ -2.05
RPA3P35244 AC010486.1-201ENST00000511793 424 ntBASIC2.22□□□□□ -2.05
RPA3P35244 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.22□□□□□ -2.05
RPA3P35244 AC022483.1-201ENST00000514020 567 ntBASIC2.22□□□□□ -2.05
RPA3P35244 RNU5A-7P-201ENST00000515979 116 ntBASIC2.22□□□□□ -2.05
RPA3P35244 RNA5SP82-201ENST00000516707 92 ntBASIC2.22□□□□□ -2.05
RPA3P35244 AC023632.1-201ENST00000518463 375 ntBASIC2.22□□□□□ -2.05
RPA3P35244 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.22□□□□□ -2.05
RPA3P35244 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.22□□□□□ -2.05
RPA3P35244 AP002770.2-201ENST00000543613 532 ntBASIC2.22□□□□□ -2.05
RPA3P35244 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RPA3P35244 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.22□□□□□ -2.05
RPA3P35244 AC044913.1-201ENST00000557200 430 ntBASIC2.22□□□□□ -2.05
RPA3P35244 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.22□□□□□ -2.05
RPA3P35244 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.22□□□□□ -2.05
RPA3P35244 MIR5194-201ENST00000582634 120 ntBASIC2.22□□□□□ -2.05
RPA3P35244 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.22□□□□□ -2.05
RPA3P35244 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.22□□□□□ -2.05
RPA3P35244 AC098483.2-201ENST00000603158 454 ntBASIC2.22□□□□□ -2.05
RPA3P35244 AC024560.3-201ENST00000608482 349 ntBASIC2.22□□□□□ -2.05
RPA3P35244 AL450472.3-201ENST00000615578 367 ntBASIC2.22□□□□□ -2.05
RPA3P35244 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.22□□□□□ -2.05
RPA3P35244 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.22□□□□□ -2.05
RPA3P35244 AC004009.2-201ENST00000623016 728 ntBASIC2.22□□□□□ -2.05
RPA3P35244 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
RPA3P35244 CR848007.1-201ENST00000442354 1699 ntBASIC2.22□□□□□ -2.05
RPA3P35244 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
RPA3P35244 AC135776.4-201ENST00000624300 1904 ntBASIC2.21□□□□□ -2.06
RPA3P35244 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RPA3P35244 RNA5SP393-201ENST00000363423 117 ntBASIC2.21□□□□□ -2.06
RPA3P35244 RNU6-461P-201ENST00000364195 107 ntBASIC2.21□□□□□ -2.06
RPA3P35244 RNU1-91P-201ENST00000364746 163 ntBASIC2.21□□□□□ -2.06
RPA3P35244 SUGT1P1-201ENST00000379514 476 ntBASIC2.21□□□□□ -2.06
RPA3P35244 AL356131.1-201ENST00000405826 414 ntBASIC2.21□□□□□ -2.06
RPA3P35244 RPS4XP7-201ENST00000406274 780 ntBASIC2.21□□□□□ -2.06
RPA3P35244 RNA5SP338-201ENST00000410495 85 ntBASIC2.21□□□□□ -2.06
RPA3P35244 RNU4-53P-201ENST00000410828 140 ntBASIC2.21□□□□□ -2.06
RPA3P35244 RNA5SP508-201ENST00000411327 119 ntBASIC2.21□□□□□ -2.06
RPA3P35244 HMGB3P2-201ENST00000411913 584 ntBASIC2.21□□□□□ -2.06
RPA3P35244 FO393414.1-201ENST00000428697 1184 ntBASIC2.21□□□□□ -2.06
RPA3P35244 MTND2P5-201ENST00000432656 1006 ntBASIC2.21□□□□□ -2.06
RPA3P35244 MTCYBP15-201ENST00000433123 1127 ntBASIC2.21□□□□□ -2.06
RPA3P35244 AC092393.1-201ENST00000439625 742 ntBASIC2.21□□□□□ -2.06
RPA3P35244 SDAD1P2-201ENST00000441308 2028 ntBASIC2.21□□□□□ -2.06
RPA3P35244 AL591719.1-201ENST00000444669 744 ntBASIC2.21□□□□□ -2.06
RPA3P35244 DDX3P2-201ENST00000446138 111 ntBASIC2.21□□□□□ -2.06
RPA3P35244 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.21□□□□□ -2.06
RPA3P35244 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.21□□□□□ -2.06
RPA3P35244 SEPT14P24-201ENST00000447236 180 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms