Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.08□□□□□ -1.92
USP6P35125 ELOCP31-201ENST00000540463 467 ntBASIC3.08□□□□□ -1.92
USP6P35125 BNIP3P24-201ENST00000593398 557 ntBASIC3.08□□□□□ -1.92
USP6P35125 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.08□□□□□ -1.92
USP6P35125 XIAPP1-201ENST00000603162 600 ntBASIC3.08□□□□□ -1.92
USP6P35125 AL451074.6-201ENST00000608512 729 ntBASIC3.08□□□□□ -1.92
USP6P35125 AC018755.4-201ENST00000619715 454 ntBASIC3.08□□□□□ -1.92
USP6P35125 U6.98-201ENST00000637157 84 ntBASIC3.08□□□□□ -1.92
USP6P35125 LRRC77P-213ENST00000637727 880 ntBASIC3.08□□□□□ -1.92
USP6P35125 AC097714.1-201ENST00000511272 1647 ntBASIC3.07□□□□□ -1.92
USP6P35125 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.07□□□□□ -1.92
USP6P35125 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.07□□□□□ -1.92
USP6P35125 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
USP6P35125 Y_RNA.192-201ENST00000363977 102 ntBASIC3.07□□□□□ -1.92
USP6P35125 Y_RNA.465-201ENST00000384293 102 ntBASIC3.07□□□□□ -1.92
USP6P35125 RNU6-636P-201ENST00000384598 107 ntBASIC3.07□□□□□ -1.92
USP6P35125 MIR221-201ENST00000385135 110 ntBASIC3.07□□□□□ -1.92
USP6P35125 EI24P1-201ENST00000416584 867 ntBASIC3.07□□□□□ -1.92
USP6P35125 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.07□□□□□ -1.92
USP6P35125 AL390023.1-201ENST00000428836 262 ntBASIC3.07□□□□□ -1.92
USP6P35125 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.07□□□□□ -1.92
USP6P35125 MTND2P20-201ENST00000440805 661 ntBASIC3.07□□□□□ -1.92
USP6P35125 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.07□□□□□ -1.92
USP6P35125 HMGB1P15-201ENST00000453854 435 ntBASIC3.07□□□□□ -1.92
USP6P35125 AC116353.3-201ENST00000511215 249 ntBASIC3.07□□□□□ -1.92
USP6P35125 AC026412.2-201ENST00000512270 1075 ntBASIC3.07□□□□□ -1.92
USP6P35125 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.07□□□□□ -1.92
USP6P35125 RNU6-27P-201ENST00000516146 107 ntBASIC3.07□□□□□ -1.92
USP6P35125 RNU2-58P-201ENST00000516403 183 ntBASIC3.07□□□□□ -1.92
USP6P35125 AP003467.2-201ENST00000520175 319 ntBASIC3.07□□□□□ -1.92
USP6P35125 SLC2A13P1-201ENST00000531560 322 ntBASIC3.07□□□□□ -1.92
USP6P35125 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.07□□□□□ -1.92
USP6P35125 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.07□□□□□ -1.92
USP6P35125 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.07□□□□□ -1.92
USP6P35125 AC105137.2-201ENST00000569073 466 ntBASIC3.07□□□□□ -1.92
USP6P35125 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.07□□□□□ -1.92
USP6P35125 MIR4506-201ENST00000584693 77 ntBASIC3.07□□□□□ -1.92
USP6P35125 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.07□□□□□ -1.92
USP6P35125 AL450336.1-201ENST00000605180 586 ntBASIC3.07□□□□□ -1.92
USP6P35125 AC006386.1-201ENST00000619436 415 ntBASIC3.07□□□□□ -1.92
USP6P35125 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.07□□□□□ -1.92
USP6P35125 MIR6733-201ENST00000635723 61 ntBASIC3.07□□□□□ -1.92
USP6P35125 MIR1322-201ENST00000638013 71 ntBASIC3.07□□□□□ -1.92
USP6P35125 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.07□□□□□ -1.92
USP6P35125 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.07□□□□□ -1.92
USP6P35125 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
USP6P35125 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
USP6P35125 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
USP6P35125 GABPAP-201ENST00000419271 1356 ntBASIC3.06□□□□□ -1.92
USP6P35125 AL161781.1-201ENST00000354277 403 ntBASIC3.06□□□□□ -1.92
USP6P35125 SNORA31-201ENST00000362607 130 ntBASIC3.06□□□□□ -1.92
USP6P35125 RNA5SP189-201ENST00000364920 115 ntBASIC3.06□□□□□ -1.92
USP6P35125 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
USP6P35125 AL023284.1-201ENST00000403956 276 ntBASIC3.06□□□□□ -1.92
USP6P35125 RNA5SP344-201ENST00000411081 104 ntBASIC3.06□□□□□ -1.92
USP6P35125 AL592310.1-201ENST00000414330 671 ntBASIC3.06□□□□□ -1.92
USP6P35125 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
USP6P35125 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.06□□□□□ -1.92
USP6P35125 TRGVB-201ENST00000453257 471 ntBASIC3.06□□□□□ -1.92
USP6P35125 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.06□□□□□ -1.92
USP6P35125 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
USP6P35125 HMGB1P22-201ENST00000505315 124 ntBASIC3.06□□□□□ -1.92
USP6P35125 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.06□□□□□ -1.92
USP6P35125 AC079395.1-201ENST00000510981 262 ntBASIC3.06□□□□□ -1.92
USP6P35125 RNU6-583P-201ENST00000516012 92 ntBASIC3.06□□□□□ -1.92
USP6P35125 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.06□□□□□ -1.92
USP6P35125 AP004371.1-201ENST00000525240 214 ntBASIC3.06□□□□□ -1.92
USP6P35125 HIGD1AP10-201ENST00000527837 282 ntBASIC3.06□□□□□ -1.92
USP6P35125 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.06□□□□□ -1.92
USP6P35125 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.06□□□□□ -1.92
USP6P35125 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.06□□□□□ -1.92
USP6P35125 OR4H12P-201ENST00000556269 907 ntBASIC3.06□□□□□ -1.92
USP6P35125 MIR4637-201ENST00000582405 84 ntBASIC3.06□□□□□ -1.92
USP6P35125 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.06□□□□□ -1.92
USP6P35125 AC245036.5-201ENST00000596330 847 ntBASIC3.06□□□□□ -1.92
USP6P35125 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.06□□□□□ -1.92
USP6P35125 AC109809.1-201ENST00000619665 545 ntBASIC3.06□□□□□ -1.92
USP6P35125 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
USP6P35125 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.06□□□□□ -1.92
USP6P35125 AP002907.1-201ENST00000606361 1430 ntBASIC3.06□□□□□ -1.92
USP6P35125 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
USP6P35125 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
USP6P35125 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
USP6P35125 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.05□□□□□ -1.92
USP6P35125 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.05□□□□□ -1.92
USP6P35125 GSTA9P-201ENST00000406231 611 ntBASIC3.05□□□□□ -1.92
USP6P35125 RN7SKP32-201ENST00000410167 303 ntBASIC3.05□□□□□ -1.92
USP6P35125 RNU2-15P-201ENST00000410692 191 ntBASIC3.05□□□□□ -1.92
USP6P35125 RN7SKP123-201ENST00000410732 291 ntBASIC3.05□□□□□ -1.92
USP6P35125 AC092447.6-201ENST00000414578 210 ntBASIC3.05□□□□□ -1.92
USP6P35125 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.05□□□□□ -1.92
USP6P35125 USP9YP11-201ENST00000427537 717 ntBASIC3.05□□□□□ -1.92
USP6P35125 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.05□□□□□ -1.92
USP6P35125 AL445669.2-201ENST00000454425 421 ntBASIC3.05□□□□□ -1.92
USP6P35125 RPL18AP17-201ENST00000455326 198 ntBASIC3.05□□□□□ -1.92
USP6P35125 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.05□□□□□ -1.92
USP6P35125 AC106872.3-201ENST00000495104 446 ntBASIC3.05□□□□□ -1.92
USP6P35125 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.05□□□□□ -1.92
USP6P35125 TMEM251P1-201ENST00000503717 318 ntBASIC3.05□□□□□ -1.92
USP6P35125 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms