Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
COL4A5P29400 Y_RNA.178-201ENST00000363832 102 ntBASIC1.9□□□□□ -2.11
COL4A5P29400 RNU6-335P-201ENST00000364563 113 ntBASIC1.9□□□□□ -2.11
COL4A5P29400 SNORD114-22-201ENST00000365423 72 ntBASIC1.9□□□□□ -2.11
COL4A5P29400 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
COL4A5P29400 Z86062.1-201ENST00000406773 777 ntBASIC1.9□□□□□ -2.11
COL4A5P29400 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.9□□□□□ -2.11
COL4A5P29400 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.9□□□□□ -2.11
COL4A5P29400 MTND1P23-201ENST00000416931 372 ntBASIC1.9□□□□□ -2.11
COL4A5P29400 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.9□□□□□ -2.11
COL4A5P29400 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
COL4A5P29400 HSPE1P28-201ENST00000443139 211 ntBASIC1.9□□□□□ -2.11
COL4A5P29400 AC009474.2-201ENST00000451383 136 ntBASIC1.9□□□□□ -2.11
COL4A5P29400 HMGN2P16-201ENST00000456802 261 ntBASIC1.9□□□□□ -2.11
COL4A5P29400 AC092991.1-201ENST00000477176 376 ntBASIC1.9□□□□□ -2.11
COL4A5P29400 AC079203.1-201ENST00000487972 404 ntBASIC1.9□□□□□ -2.11
COL4A5P29400 RPL23AP55-201ENST00000498163 452 ntBASIC1.9□□□□□ -2.11
COL4A5P29400 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.9□□□□□ -2.11
COL4A5P29400 MIR4448-201ENST00000584360 86 ntBASIC1.9□□□□□ -2.11
COL4A5P29400 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.9□□□□□ -2.11
COL4A5P29400 AC068620.4-201ENST00000636730 1182 ntBASIC1.9□□□□□ -2.11
COL4A5P29400 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL4A5P29400 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
COL4A5P29400 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL4A5P29400 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.89□□□□□ -2.11
COL4A5P29400 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.89□□□□□ -2.11
COL4A5P29400 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
COL4A5P29400 ZNF736P10Y-201ENST00000403990 1110 ntBASIC1.89□□□□□ -2.11
COL4A5P29400 AC073264.1-201ENST00000411508 416 ntBASIC1.89□□□□□ -2.11
COL4A5P29400 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.89□□□□□ -2.11
COL4A5P29400 AL512504.1-201ENST00000415494 778 ntBASIC1.89□□□□□ -2.11
COL4A5P29400 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.89□□□□□ -2.11
COL4A5P29400 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.89□□□□□ -2.11
COL4A5P29400 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.89□□□□□ -2.11
COL4A5P29400 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
COL4A5P29400 MTND2P29-201ENST00000438595 412 ntBASIC1.89□□□□□ -2.11
COL4A5P29400 PIGFP3-201ENST00000441918 722 ntBASIC1.89□□□□□ -2.11
COL4A5P29400 RSL24D1P2-201ENST00000445584 366 ntBASIC1.89□□□□□ -2.11
COL4A5P29400 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.89□□□□□ -2.11
COL4A5P29400 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.89□□□□□ -2.11
COL4A5P29400 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.89□□□□□ -2.11
COL4A5P29400 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
COL4A5P29400 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.89□□□□□ -2.11
COL4A5P29400 AC008885.2-201ENST00000509506 930 ntBASIC1.89□□□□□ -2.11
COL4A5P29400 AC011604.1-201ENST00000545978 196 ntBASIC1.89□□□□□ -2.11
COL4A5P29400 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.89□□□□□ -2.11
COL4A5P29400 SNORD53B-201ENST00000577887 78 ntBASIC1.89□□□□□ -2.11
COL4A5P29400 AL590282.1-201ENST00000610379 1136 ntBASIC1.89□□□□□ -2.11
COL4A5P29400 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
COL4A5P29400 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.89□□□□□ -2.11
COL4A5P29400 ZNF37BP-203ENST00000452306 1352 ntBASIC1.88□□□□□ -2.11
COL4A5P29400 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
COL4A5P29400 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
COL4A5P29400 OR4G1P-203ENST00000641984 1631 ntBASIC1.88□□□□□ -2.11
COL4A5P29400 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.88□□□□□ -2.11
COL4A5P29400 RNU6-1243P-201ENST00000364028 107 ntBASIC1.88□□□□□ -2.11
COL4A5P29400 AL589655.1-201ENST00000405398 482 ntBASIC1.88□□□□□ -2.11
COL4A5P29400 RPL21P32-201ENST00000419877 477 ntBASIC1.88□□□□□ -2.11
COL4A5P29400 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.88□□□□□ -2.11
COL4A5P29400 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.88□□□□□ -2.11
COL4A5P29400 AC097499.1-201ENST00000444277 208 ntBASIC1.88□□□□□ -2.11
COL4A5P29400 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.88□□□□□ -2.11
COL4A5P29400 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.88□□□□□ -2.11
COL4A5P29400 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.88□□□□□ -2.11
COL4A5P29400 SNORA31.26-201ENST00000517250 137 ntBASIC1.88□□□□□ -2.11
COL4A5P29400 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.88□□□□□ -2.11
COL4A5P29400 DNAJC8P1-201ENST00000554535 372 ntBASIC1.88□□□□□ -2.11
COL4A5P29400 MIR4504-201ENST00000577413 92 ntBASIC1.88□□□□□ -2.11
COL4A5P29400 AL133393.1-201ENST00000603277 287 ntBASIC1.88□□□□□ -2.11
COL4A5P29400 DPRXP5-201ENST00000604662 539 ntBASIC1.88□□□□□ -2.11
COL4A5P29400 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC1.88□□□□□ -2.11
COL4A5P29400 AC006963.1-201ENST00000624003 1052 ntBASIC1.88□□□□□ -2.11
COL4A5P29400 MIR3199-2-201ENST00000636243 86 ntBASIC1.88□□□□□ -2.11
COL4A5P29400 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
COL4A5P29400 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.87□□□□□ -2.11
COL4A5P29400 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
COL4A5P29400 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
COL4A5P29400 UBE2V1P9-201ENST00000414760 368 ntBASIC1.87□□□□□ -2.11
COL4A5P29400 USP9YP27-201ENST00000418455 438 ntBASIC1.87□□□□□ -2.11
COL4A5P29400 UBE2V2P3-201ENST00000433562 437 ntBASIC1.87□□□□□ -2.11
COL4A5P29400 TPT1P14-201ENST00000448018 505 ntBASIC1.87□□□□□ -2.11
COL4A5P29400 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.87□□□□□ -2.11
COL4A5P29400 AC104057.1-201ENST00000515547 497 ntBASIC1.87□□□□□ -2.11
COL4A5P29400 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.87□□□□□ -2.11
COL4A5P29400 AP004371.1-201ENST00000525240 214 ntBASIC1.87□□□□□ -2.11
COL4A5P29400 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.87□□□□□ -2.11
COL4A5P29400 AC011374.2-201ENST00000607135 526 ntBASIC1.87□□□□□ -2.11
COL4A5P29400 AC104307.1-201ENST00000616142 196 ntBASIC1.87□□□□□ -2.11
COL4A5P29400 AP003122.6-201ENST00000623831 495 ntBASIC1.87□□□□□ -2.11
COL4A5P29400 AC098679.5-201ENST00000624394 571 ntBASIC1.87□□□□□ -2.11
COL4A5P29400 AC002546.1-201ENST00000588041 2504 ntBASIC1.87□□□□□ -2.11
COL4A5P29400 SNRPEP2-201ENST00000397592 279 ntBASIC1.86□□□□□ -2.11
COL4A5P29400 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.86□□□□□ -2.11
COL4A5P29400 AC004865.1-201ENST00000442276 1003 ntBASIC1.86□□□□□ -2.11
COL4A5P29400 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.86□□□□□ -2.11
COL4A5P29400 HMGN3P1-201ENST00000453847 193 ntBASIC1.86□□□□□ -2.11
COL4A5P29400 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.86□□□□□ -2.11
COL4A5P29400 AC073901.1-201ENST00000462471 408 ntBASIC1.86□□□□□ -2.11
COL4A5P29400 AC090255.1-201ENST00000495779 349 ntBASIC1.86□□□□□ -2.11
COL4A5P29400 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms