Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 ARL4AP2-201ENST00000507378 601 ntBASIC3□□□□□ -1.93
PTPN4P29074 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
PTPN4P29074 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3□□□□□ -1.93
PTPN4P29074 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3□□□□□ -1.93
PTPN4P29074 AC017037.2-201ENST00000513850 890 ntBASIC3□□□□□ -1.93
PTPN4P29074 AC105185.1-201ENST00000518705 535 ntBASIC3□□□□□ -1.93
PTPN4P29074 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3□□□□□ -1.93
PTPN4P29074 AP000867.2-201ENST00000532468 320 ntBASIC3□□□□□ -1.93
PTPN4P29074 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3□□□□□ -1.93
PTPN4P29074 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3□□□□□ -1.93
PTPN4P29074 AL354943.1-201ENST00000572103 781 ntBASIC3□□□□□ -1.93
PTPN4P29074 AC006504.3-201ENST00000586818 523 ntBASIC3□□□□□ -1.93
PTPN4P29074 AC105224.1-201ENST00000587055 421 ntBASIC3□□□□□ -1.93
PTPN4P29074 HNRNPDLP4-201ENST00000605144 301 ntBASIC3□□□□□ -1.93
PTPN4P29074 AC093732.2-201ENST00000607950 274 ntBASIC3□□□□□ -1.93
PTPN4P29074 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3□□□□□ -1.93
PTPN4P29074 AC021755.4-201ENST00000616620 456 ntBASIC3□□□□□ -1.93
PTPN4P29074 AC009268.2-201ENST00000621925 457 ntBASIC3□□□□□ -1.93
PTPN4P29074 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3□□□□□ -1.93
PTPN4P29074 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3□□□□□ -1.93
PTPN4P29074 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3□□□□□ -1.93
PTPN4P29074 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3□□□□□ -1.93
PTPN4P29074 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3□□□□□ -1.93
PTPN4P29074 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.99□□□□□ -1.93
PTPN4P29074 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.99□□□□□ -1.93
PTPN4P29074 ASNSP3-201ENST00000451989 1306 ntBASIC2.99□□□□□ -1.93
PTPN4P29074 AL365361.1-201ENST00000566942 3481 ntBASIC2.99□□□□□ -1.93
PTPN4P29074 OR1S2-201ENST00000302592 978 ntBASIC2.99□□□□□ -1.93
PTPN4P29074 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
PTPN4P29074 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
PTPN4P29074 SNORA26.7-201ENST00000391288 122 ntBASIC2.99□□□□□ -1.93
PTPN4P29074 RSL24D1P4-201ENST00000400938 484 ntBASIC2.99□□□□□ -1.93
PTPN4P29074 RPL5P18-201ENST00000406671 891 ntBASIC2.99□□□□□ -1.93
PTPN4P29074 RPL35AP12-201ENST00000425362 338 ntBASIC2.99□□□□□ -1.93
PTPN4P29074 UBE2V1P13-201ENST00000436983 439 ntBASIC2.99□□□□□ -1.93
PTPN4P29074 THAP5P1-201ENST00000439089 262 ntBASIC2.99□□□□□ -1.93
PTPN4P29074 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.99□□□□□ -1.93
PTPN4P29074 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.99□□□□□ -1.93
PTPN4P29074 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.99□□□□□ -1.93
PTPN4P29074 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.99□□□□□ -1.93
PTPN4P29074 ANKRD26P4-201ENST00000455755 950 ntBASIC2.99□□□□□ -1.93
PTPN4P29074 RPL31P60-201ENST00000478450 367 ntBASIC2.99□□□□□ -1.93
PTPN4P29074 MTND2P14-201ENST00000482139 351 ntBASIC2.99□□□□□ -1.93
PTPN4P29074 AC021382.1-201ENST00000483523 359 ntBASIC2.99□□□□□ -1.93
PTPN4P29074 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PTPN4P29074 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.99□□□□□ -1.93
PTPN4P29074 AC093281.2-201ENST00000510153 597 ntBASIC2.99□□□□□ -1.93
PTPN4P29074 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.99□□□□□ -1.93
PTPN4P29074 Y_RNA.717-201ENST00000517106 92 ntBASIC2.99□□□□□ -1.93
PTPN4P29074 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.99□□□□□ -1.93
PTPN4P29074 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.99□□□□□ -1.93
PTPN4P29074 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.99□□□□□ -1.93
PTPN4P29074 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.99□□□□□ -1.93
PTPN4P29074 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.99□□□□□ -1.93
PTPN4P29074 AL158211.1-201ENST00000566763 763 ntBASIC2.99□□□□□ -1.93
PTPN4P29074 RPL23AP84-201ENST00000571193 464 ntBASIC2.99□□□□□ -1.93
PTPN4P29074 AC034268.2-201ENST00000571784 482 ntBASIC2.99□□□□□ -1.93
PTPN4P29074 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.99□□□□□ -1.93
PTPN4P29074 OR4K8P-201ENST00000578842 1048 ntBASIC2.99□□□□□ -1.93
PTPN4P29074 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.99□□□□□ -1.93
PTPN4P29074 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.99□□□□□ -1.93
PTPN4P29074 AL139418.1-201ENST00000613613 177 ntBASIC2.99□□□□□ -1.93
PTPN4P29074 AL161629.2-201ENST00000615347 275 ntBASIC2.99□□□□□ -1.93
PTPN4P29074 Z99129.2-201ENST00000619967 314 ntBASIC2.99□□□□□ -1.93
PTPN4P29074 AC079597.1-201ENST00000624306 508 ntBASIC2.99□□□□□ -1.93
PTPN4P29074 AC079228.1-201ENST00000624774 1049 ntBASIC2.99□□□□□ -1.93
PTPN4P29074 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.99□□□□□ -1.93
PTPN4P29074 AC092447.7-201ENST00000422212 1621 ntBASIC2.99□□□□□ -1.93
PTPN4P29074 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.99□□□□□ -1.93
PTPN4P29074 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PTPN4P29074 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PTPN4P29074 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PTPN4P29074 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.98□□□□□ -1.93
PTPN4P29074 API5P2-201ENST00000397055 1498 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PTPN4P29074 RNU6-1214P-201ENST00000363650 109 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 RNU6-1078P-201ENST00000364522 103 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 RNU6-7-201ENST00000364784 107 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 RNU6-8-201ENST00000365467 107 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.98□□□□□ -1.93
PTPN4P29074 RNU6-76P-201ENST00000384060 104 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 MTND4P13-201ENST00000402078 1023 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 AL356421.1-201ENST00000403255 413 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.98□□□□□ -1.93
PTPN4P29074 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.98□□□□□ -1.93
PTPN4P29074 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.98□□□□□ -1.93
PTPN4P29074 RPL23AP58-201ENST00000440453 469 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.98□□□□□ -1.93
PTPN4P29074 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.98□□□□□ -1.93
PTPN4P29074 SNRPGP6-201ENST00000451124 220 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 RPL9P33-201ENST00000484311 566 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 AC034222.1-201ENST00000494052 532 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 AC080014.1-201ENST00000496877 1201 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 AC097462.2-201ENST00000504623 481 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.98□□□□□ -1.93
PTPN4P29074 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.98□□□□□ -1.93
PTPN4P29074 SNORA31.26-201ENST00000517250 137 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.98□□□□□ -1.93
PTPN4P29074 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms