Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
XPAP23025 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
XPAP23025 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
XPAP23025 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
XPAP23025 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
XPAP23025 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.31□□□□□ -1.72
XPAP23025 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
XPAP23025 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.31□□□□□ -1.72
XPAP23025 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
XPAP23025 RNU6-960P-201ENST00000364056 120 ntBASIC4.31□□□□□ -1.72
XPAP23025 SNORA51.2-201ENST00000364595 132 ntBASIC4.31□□□□□ -1.72
XPAP23025 RNU4-66P-201ENST00000365199 138 ntBASIC4.31□□□□□ -1.72
XPAP23025 SNORD115-7-201ENST00000365306 82 ntBASIC4.31□□□□□ -1.72
XPAP23025 SMIM11P1-201ENST00000369586 178 ntBASIC4.31□□□□□ -1.72
XPAP23025 Y_RNA.576-201ENST00000384781 102 ntBASIC4.31□□□□□ -1.72
XPAP23025 MIR3074-201ENST00000384885 81 ntBASIC4.31□□□□□ -1.72
XPAP23025 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
XPAP23025 NDUFB4P5-201ENST00000415445 361 ntBASIC4.31□□□□□ -1.72
XPAP23025 AL161631.1-201ENST00000417933 486 ntBASIC4.31□□□□□ -1.72
XPAP23025 AC099677.1-201ENST00000420575 175 ntBASIC4.31□□□□□ -1.72
XPAP23025 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.31□□□□□ -1.72
XPAP23025 AL645937.1-202ENST00000421799 937 ntBASIC4.31□□□□□ -1.72
XPAP23025 ERLEC1P1-201ENST00000433806 578 ntBASIC4.31□□□□□ -1.72
XPAP23025 AC004866.2-201ENST00000438285 481 ntBASIC4.31□□□□□ -1.72
XPAP23025 MTCO3P45-201ENST00000443036 613 ntBASIC4.31□□□□□ -1.72
XPAP23025 RPS11P1-201ENST00000451072 473 ntBASIC4.31□□□□□ -1.72
XPAP23025 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.31□□□□□ -1.72
XPAP23025 RPL23AP81-201ENST00000455252 467 ntBASIC4.31□□□□□ -1.72
XPAP23025 SNORD97-201ENST00000459187 142 ntBASIC4.31□□□□□ -1.72
XPAP23025 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.31□□□□□ -1.72
XPAP23025 RPL31P13-201ENST00000484151 370 ntBASIC4.31□□□□□ -1.72
XPAP23025 RNU4-49P-201ENST00000516080 140 ntBASIC4.31□□□□□ -1.72
XPAP23025 Y_RNA.665-201ENST00000516177 98 ntBASIC4.31□□□□□ -1.72
XPAP23025 RNA5SP519-201ENST00000516480 119 ntBASIC4.31□□□□□ -1.72
XPAP23025 RNU6-1038P-201ENST00000516516 104 ntBASIC4.31□□□□□ -1.72
XPAP23025 MYL12AP1-201ENST00000518490 515 ntBASIC4.31□□□□□ -1.72
XPAP23025 AC105029.1-201ENST00000520250 669 ntBASIC4.31□□□□□ -1.72
XPAP23025 HMGN1P28-201ENST00000521340 364 ntBASIC4.31□□□□□ -1.72
XPAP23025 AP004371.1-201ENST00000525240 214 ntBASIC4.31□□□□□ -1.72
XPAP23025 AC022690.1-201ENST00000526681 550 ntBASIC4.31□□□□□ -1.72
XPAP23025 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
XPAP23025 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
XPAP23025 AL118558.2-201ENST00000556294 238 ntBASIC4.31□□□□□ -1.72
XPAP23025 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.31□□□□□ -1.72
XPAP23025 RPL23AP97-201ENST00000568955 471 ntBASIC4.31□□□□□ -1.72
XPAP23025 MIR4424-201ENST00000585257 86 ntBASIC4.31□□□□□ -1.72
XPAP23025 AC044792.1-201ENST00000593294 196 ntBASIC4.31□□□□□ -1.72
XPAP23025 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
XPAP23025 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.31□□□□□ -1.72
XPAP23025 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.31□□□□□ -1.72
XPAP23025 OR52H1-202ENST00000641796 1061 ntBASIC4.31□□□□□ -1.72
XPAP23025 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.31□□□□□ -1.72
XPAP23025 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.31□□□□□ -1.72
XPAP23025 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
XPAP23025 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
XPAP23025 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
XPAP23025 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
XPAP23025 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.3□□□□□ -1.72
XPAP23025 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
XPAP23025 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
XPAP23025 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
XPAP23025 RNU1-14P-201ENST00000362759 152 ntBASIC4.3□□□□□ -1.72
XPAP23025 Y_RNA.58-201ENST00000362807 102 ntBASIC4.3□□□□□ -1.72
XPAP23025 Y_RNA.154-201ENST00000363624 102 ntBASIC4.3□□□□□ -1.72
XPAP23025 RNU6-1284P-201ENST00000363701 100 ntBASIC4.3□□□□□ -1.72
XPAP23025 RNY3P1-201ENST00000365085 102 ntBASIC4.3□□□□□ -1.72
XPAP23025 RNY3-201ENST00000365484 102 ntBASIC4.3□□□□□ -1.72
XPAP23025 AC068538.1-201ENST00000376856 336 ntBASIC4.3□□□□□ -1.72
XPAP23025 RNU6-1181P-201ENST00000384191 106 ntBASIC4.3□□□□□ -1.72
XPAP23025 Y_RNA.490-201ENST00000384413 102 ntBASIC4.3□□□□□ -1.72
XPAP23025 SNORA70C-201ENST00000384538 135 ntBASIC4.3□□□□□ -1.72
XPAP23025 SOD2P1-201ENST00000396543 562 ntBASIC4.3□□□□□ -1.72
XPAP23025 AL583835.1-201ENST00000399570 407 ntBASIC4.3□□□□□ -1.72
XPAP23025 AL359634.1-202ENST00000404721 284 ntBASIC4.3□□□□□ -1.72
XPAP23025 AL606923.1-201ENST00000406616 190 ntBASIC4.3□□□□□ -1.72
XPAP23025 RNA5SP146-201ENST00000410743 123 ntBASIC4.3□□□□□ -1.72
XPAP23025 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.3□□□□□ -1.72
XPAP23025 AL157831.1-201ENST00000426134 473 ntBASIC4.3□□□□□ -1.72
XPAP23025 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.3□□□□□ -1.72
XPAP23025 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.3□□□□□ -1.72
XPAP23025 AC090774.1-201ENST00000435925 246 ntBASIC4.3□□□□□ -1.72
XPAP23025 IFNA20P-201ENST00000436840 528 ntBASIC4.3□□□□□ -1.72
XPAP23025 AL590639.1-201ENST00000456484 337 ntBASIC4.3□□□□□ -1.72
XPAP23025 RNU7-180P-201ENST00000459240 63 ntBASIC4.3□□□□□ -1.72
XPAP23025 RPS29P19-201ENST00000479709 171 ntBASIC4.3□□□□□ -1.72
XPAP23025 AC104164.2-201ENST00000496953 495 ntBASIC4.3□□□□□ -1.72
XPAP23025 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.3□□□□□ -1.72
XPAP23025 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.3□□□□□ -1.72
XPAP23025 AC100870.1-201ENST00000522035 505 ntBASIC4.3□□□□□ -1.72
XPAP23025 AC008489.1-201ENST00000524271 483 ntBASIC4.3□□□□□ -1.72
XPAP23025 AC109635.4-202ENST00000531666 412 ntBASIC4.3□□□□□ -1.72
XPAP23025 AC087241.2-201ENST00000535801 324 ntBASIC4.3□□□□□ -1.72
XPAP23025 TRAV8-5-201ENST00000537369 341 ntBASIC4.3□□□□□ -1.72
XPAP23025 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.3□□□□□ -1.72
XPAP23025 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.3□□□□□ -1.72
XPAP23025 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.3□□□□□ -1.72
XPAP23025 AC037471.2-201ENST00000564941 598 ntBASIC4.3□□□□□ -1.72
XPAP23025 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.3□□□□□ -1.72
XPAP23025 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.3□□□□□ -1.72
XPAP23025 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms