Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN1P18031 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN1P18031 RNU6-1287P-201ENST00000362914 107 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 Y_RNA.138-201ENST00000363462 102 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 Y_RNA.378-201ENST00000365652 113 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN1P18031 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN1P18031 Y_RNA.414-201ENST00000384011 101 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 RNU6-1013P-201ENST00000384180 107 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 RNU6-1060P-201ENST00000384664 107 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 SOD2P1-201ENST00000396543 562 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 AL592114.1-201ENST00000403842 483 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 RNU6-387P-201ENST00000411331 105 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 BTF3L4P3-201ENST00000418879 476 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 AL137014.1-201ENST00000420490 1226 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 RBMY1KP-201ENST00000423480 476 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 RAC1P6-201ENST00000423911 575 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 AC093106.2-201ENST00000428212 385 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN1P18031 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.5□□□□□ -1.69
PTPN1P18031 COX6B1P7-201ENST00000430845 235 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 RPL29P29-201ENST00000448725 423 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 AL162389.1-201ENST00000449233 177 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.5□□□□□ -1.69
PTPN1P18031 RNU6-1208P-201ENST00000459588 107 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 SNORD19B-201ENST00000459623 84 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN1P18031 AC008481.1-201ENST00000463278 396 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 MTND4P17-201ENST00000470444 350 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 AC068587.1-201ENST00000483613 781 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 RN7SL432P-201ENST00000484057 298 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 MTCO1P29-201ENST00000496868 288 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.5□□□□□ -1.69
PTPN1P18031 AC104806.1-201ENST00000508720 308 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.5□□□□□ -1.69
PTPN1P18031 AC108078.2-201ENST00000510750 236 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 AC026801.2-201ENST00000515352 425 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.5□□□□□ -1.69
PTPN1P18031 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN1P18031 AL137161.1-201ENST00000532231 390 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.5□□□□□ -1.69
PTPN1P18031 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.5□□□□□ -1.69
PTPN1P18031 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN1P18031 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN1P18031 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.5□□□□□ -1.69
PTPN1P18031 MIR6130-201ENST00000619419 109 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN1P18031 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN1P18031 AP001350.1-201ENST00000601906 1524 ntBASIC4.5□□□□□ -1.69
PTPN1P18031 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN1P18031 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PTPN1P18031 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.5□□□□□ -1.69
PTPN1P18031 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PTPN1P18031 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN1P18031 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN1P18031 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN1P18031 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN1P18031 AL356489.2-201ENST00000566968 3528 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
PTPN1P18031 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN1P18031 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN1P18031 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN1P18031 RNU1-15P-201ENST00000353977 144 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 SNORA70C-201ENST00000384538 135 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 AL359634.1-202ENST00000404721 284 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 RNU4-46P-201ENST00000410818 138 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 RPS7P15-201ENST00000415804 584 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.49□□□□□ -1.69
PTPN1P18031 AL353729.1-201ENST00000425044 720 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 RPL7P46-201ENST00000425129 740 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN1P18031 RPL23AP33-201ENST00000442301 452 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 MTCO3P45-201ENST00000443036 613 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.49□□□□□ -1.69
PTPN1P18031 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
PTPN1P18031 RPS29P19-201ENST00000479709 171 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 AC083904.1-201ENST00000487828 231 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 Y_RNA.654-201ENST00000497848 106 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 RPL23AP55-201ENST00000498163 452 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 CCDC34P1-201ENST00000507441 517 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 RNU6-864P-201ENST00000516256 108 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 IGLV3-26-201ENST00000520756 302 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 AP001804.3-201ENST00000525146 880 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.49□□□□□ -1.69
PTPN1P18031 MIR5583-1-201ENST00000580941 59 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 AL670379.6-201ENST00000603753 252 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 AL670379.11-201ENST00000604059 253 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 AC008162.1-201ENST00000604718 254 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 AL670379.1-201ENST00000604752 252 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 AL670379.5-201ENST00000605253 252 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 AL034351.1-201ENST00000605288 668 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 AL670379.12-201ENST00000605291 253 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 AL670379.8-201ENST00000605353 252 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 CTHRC1P1-201ENST00000605383 469 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 AL670379.7-201ENST00000605823 252 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN1P18031 AL365204.3-201ENST00000612448 685 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 uc_338.15-201ENST00000615470 191 ntBASIC4.49□□□□□ -1.69
PTPN1P18031 U73479.1-201ENST00000618062 168 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms