Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RPL23AP33-201ENST00000442301 452 ntBASIC1.38□□□□□ -2.19
HMGA1P17096 PSPHP1-201ENST00000450062 261 ntBASIC1.38□□□□□ -2.19
HMGA1P17096 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.38□□□□□ -2.19
HMGA1P17096 RNU7-26P-201ENST00000458980 63 ntBASIC1.38□□□□□ -2.19
HMGA1P17096 SNORA31.23-201ENST00000517219 133 ntBASIC1.38□□□□□ -2.19
HMGA1P17096 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
HMGA1P17096 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC1.38□□□□□ -2.19
HMGA1P17096 AP005597.4-201ENST00000526762 229 ntBASIC1.38□□□□□ -2.19
HMGA1P17096 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.38□□□□□ -2.19
HMGA1P17096 AC008749.1-201ENST00000597650 306 ntBASIC1.38□□□□□ -2.19
HMGA1P17096 BNIP3P8-201ENST00000597863 560 ntBASIC1.38□□□□□ -2.19
HMGA1P17096 AL110115.1-201ENST00000614396 364 ntBASIC1.38□□□□□ -2.19
HMGA1P17096 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
HMGA1P17096 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HMGA1P17096 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.38□□□□□ -2.19
HMGA1P17096 AP000560.1-201ENST00000624150 1937 ntBASIC1.38□□□□□ -2.19
HMGA1P17096 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.37□□□□□ -2.19
HMGA1P17096 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.37□□□□□ -2.19
HMGA1P17096 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
HMGA1P17096 RNU6-203P-201ENST00000384038 104 ntBASIC1.37□□□□□ -2.19
HMGA1P17096 RNA5SP252-201ENST00000391131 119 ntBASIC1.37□□□□□ -2.19
HMGA1P17096 SNORA40.6-201ENST00000391153 128 ntBASIC1.37□□□□□ -2.19
HMGA1P17096 RPS20P15-201ENST00000412792 311 ntBASIC1.37□□□□□ -2.19
HMGA1P17096 IFNA20P-201ENST00000436840 528 ntBASIC1.37□□□□□ -2.19
HMGA1P17096 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.37□□□□□ -2.19
HMGA1P17096 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
HMGA1P17096 RPL23AP41-201ENST00000484754 458 ntBASIC1.37□□□□□ -2.19
HMGA1P17096 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.37□□□□□ -2.19
HMGA1P17096 RN7SKP31-201ENST00000516354 278 ntBASIC1.37□□□□□ -2.19
HMGA1P17096 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.37□□□□□ -2.19
HMGA1P17096 SETP7-201ENST00000552169 453 ntBASIC1.37□□□□□ -2.19
HMGA1P17096 AGGF1P5-201ENST00000567900 919 ntBASIC1.37□□□□□ -2.19
HMGA1P17096 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.37□□□□□ -2.19
HMGA1P17096 COX6CP3-201ENST00000580869 223 ntBASIC1.37□□□□□ -2.19
HMGA1P17096 AC069304.3-201ENST00000603938 1084 ntBASIC1.37□□□□□ -2.19
HMGA1P17096 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.37□□□□□ -2.19
HMGA1P17096 AL590282.1-201ENST00000610379 1136 ntBASIC1.37□□□□□ -2.19
HMGA1P17096 AC091932.3-201ENST00000624223 323 ntBASIC1.37□□□□□ -2.19
HMGA1P17096 SNORA16B-201ENST00000364674 135 ntBASIC1.36□□□□□ -2.19
HMGA1P17096 AL590084.1-201ENST00000407885 387 ntBASIC1.36□□□□□ -2.19
HMGA1P17096 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.36□□□□□ -2.19
HMGA1P17096 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.36□□□□□ -2.19
HMGA1P17096 RPS3AP44-201ENST00000425466 790 ntBASIC1.36□□□□□ -2.19
HMGA1P17096 TAF9P1-201ENST00000445421 515 ntBASIC1.36□□□□□ -2.19
HMGA1P17096 TAF9P2-201ENST00000454958 515 ntBASIC1.36□□□□□ -2.19
HMGA1P17096 FAM172BP-201ENST00000487497 1089 ntBASIC1.36□□□□□ -2.19
HMGA1P17096 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
HMGA1P17096 AC110792.2-201ENST00000510278 224 ntBASIC1.36□□□□□ -2.19
HMGA1P17096 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.36□□□□□ -2.19
HMGA1P17096 ERHP1-201ENST00000523006 310 ntBASIC1.36□□□□□ -2.19
HMGA1P17096 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.36□□□□□ -2.19
HMGA1P17096 AP002748.2-201ENST00000528671 348 ntBASIC1.36□□□□□ -2.19
HMGA1P17096 AC109635.4-202ENST00000531666 412 ntBASIC1.36□□□□□ -2.19
HMGA1P17096 CYCSP26-201ENST00000534107 320 ntBASIC1.36□□□□□ -2.19
HMGA1P17096 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.36□□□□□ -2.19
HMGA1P17096 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.36□□□□□ -2.19
HMGA1P17096 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.36□□□□□ -2.19
HMGA1P17096 AC098848.2-201ENST00000588023 330 ntBASIC1.36□□□□□ -2.19
HMGA1P17096 U73023.1-201ENST00000603134 700 ntBASIC1.36□□□□□ -2.19
HMGA1P17096 AC034236.3-201ENST00000605999 461 ntBASIC1.36□□□□□ -2.19
HMGA1P17096 AC139769.3-201ENST00000618383 175 ntBASIC1.36□□□□□ -2.19
HMGA1P17096 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.36□□□□□ -2.19
HMGA1P17096 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
HMGA1P17096 MTND5P10-201ENST00000603719 1809 ntBASIC1.36□□□□□ -2.19
HMGA1P17096 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.35□□□□□ -2.19
HMGA1P17096 AC096656.1-201ENST00000623826 1364 ntBASIC1.35□□□□□ -2.19
HMGA1P17096 SNORA46.1-201ENST00000391069 153 ntBASIC1.35□□□□□ -2.19
HMGA1P17096 AL356379.1-201ENST00000414105 126 ntBASIC1.35□□□□□ -2.19
HMGA1P17096 AL606495.1-201ENST00000422100 813 ntBASIC1.35□□□□□ -2.19
HMGA1P17096 UBE2V1P13-201ENST00000436983 439 ntBASIC1.35□□□□□ -2.19
HMGA1P17096 FABP5P3-201ENST00000437960 408 ntBASIC1.35□□□□□ -2.19
HMGA1P17096 ARL5AP2-201ENST00000444698 533 ntBASIC1.35□□□□□ -2.19
HMGA1P17096 AL513343.1-201ENST00000451818 792 ntBASIC1.35□□□□□ -2.19
HMGA1P17096 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.35□□□□□ -2.19
HMGA1P17096 AC015908.1-201ENST00000478739 476 ntBASIC1.35□□□□□ -2.19
HMGA1P17096 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.35□□□□□ -2.19
HMGA1P17096 HMGN1P7-201ENST00000491722 313 ntBASIC1.35□□□□□ -2.19
HMGA1P17096 CASP1P1-201ENST00000526345 212 ntBASIC1.35□□□□□ -2.19
HMGA1P17096 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.35□□□□□ -2.19
HMGA1P17096 CBX3P2-202ENST00000583365 535 ntBASIC1.35□□□□□ -2.19
HMGA1P17096 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.35□□□□□ -2.19
HMGA1P17096 HMGB1P24-202ENST00000615653 685 ntBASIC1.35□□□□□ -2.19
HMGA1P17096 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.35□□□□□ -2.19
HMGA1P17096 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
HMGA1P17096 AC009902.3-201ENST00000606235 2172 ntBASIC1.34□□□□□ -2.19
HMGA1P17096 AC233981.2-201ENST00000611524 1614 ntBASIC1.34□□□□□ -2.19
HMGA1P17096 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
HMGA1P17096 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
HMGA1P17096 MIR1287-201ENST00000408492 90 ntBASIC1.34□□□□□ -2.19
HMGA1P17096 MIR1276-201ENST00000408707 83 ntBASIC1.34□□□□□ -2.19
HMGA1P17096 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.34□□□□□ -2.19
HMGA1P17096 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.34□□□□□ -2.19
HMGA1P17096 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.34□□□□□ -2.19
HMGA1P17096 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.34□□□□□ -2.19
HMGA1P17096 VN1R108P-201ENST00000431580 830 ntBASIC1.34□□□□□ -2.19
HMGA1P17096 AC244505.5-201ENST00000443639 207 ntBASIC1.34□□□□□ -2.19
HMGA1P17096 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.34□□□□□ -2.19
HMGA1P17096 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.34□□□□□ -2.19
HMGA1P17096 AP002345.1-201ENST00000456493 928 ntBASIC1.34□□□□□ -2.19
HMGA1P17096 ATG12P2-201ENST00000456830 416 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms