Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
COL11A1P12107 DEFB109C-201ENST00000382575 264 ntBASIC1.95□□□□□ -2.1
COL11A1P12107 DEFB109B-201ENST00000382656 264 ntBASIC1.95□□□□□ -2.1
COL11A1P12107 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
COL11A1P12107 NUP35P2-201ENST00000416748 943 ntBASIC1.95□□□□□ -2.1
COL11A1P12107 MTND1P23-201ENST00000416931 372 ntBASIC1.95□□□□□ -2.1
COL11A1P12107 AL512637.2-201ENST00000431287 1256 ntBASIC1.95□□□□□ -2.1
COL11A1P12107 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.95□□□□□ -2.1
COL11A1P12107 AC092473.1-201ENST00000441098 221 ntBASIC1.95□□□□□ -2.1
COL11A1P12107 AC092685.1-201ENST00000447960 1243 ntBASIC1.95□□□□□ -2.1
COL11A1P12107 AL034418.1-201ENST00000448675 860 ntBASIC1.95□□□□□ -2.1
COL11A1P12107 RPS24P6-201ENST00000452670 400 ntBASIC1.95□□□□□ -2.1
COL11A1P12107 MTCO3P35-201ENST00000485582 781 ntBASIC1.95□□□□□ -2.1
COL11A1P12107 AC107398.1-201ENST00000486904 505 ntBASIC1.95□□□□□ -2.1
COL11A1P12107 AC008885.2-201ENST00000509506 930 ntBASIC1.95□□□□□ -2.1
COL11A1P12107 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.95□□□□□ -2.1
COL11A1P12107 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.95□□□□□ -2.1
COL11A1P12107 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
COL11A1P12107 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
COL11A1P12107 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.95□□□□□ -2.1
COL11A1P12107 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.95□□□□□ -2.1
COL11A1P12107 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.95□□□□□ -2.1
COL11A1P12107 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.95□□□□□ -2.1
COL11A1P12107 TMF1P1-201ENST00000576058 373 ntBASIC1.95□□□□□ -2.1
COL11A1P12107 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC1.95□□□□□ -2.1
COL11A1P12107 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.95□□□□□ -2.1
COL11A1P12107 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.95□□□□□ -2.1
COL11A1P12107 AC068620.3-201ENST00000602749 560 ntBASIC1.95□□□□□ -2.1
COL11A1P12107 AC016542.1-201ENST00000608259 493 ntBASIC1.95□□□□□ -2.1
COL11A1P12107 AC253576.2-201ENST00000618815 580 ntBASIC1.95□□□□□ -2.1
COL11A1P12107 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.95□□□□□ -2.1
COL11A1P12107 RNU6-335P-201ENST00000364563 113 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.94□□□□□ -2.1
COL11A1P12107 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.94□□□□□ -2.1
COL11A1P12107 snoU13.3-201ENST00000459441 104 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 snoU109.3-201ENST00000459477 145 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 AC015908.1-201ENST00000478739 476 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 AC104629.1-201ENST00000494226 508 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 AC090255.1-201ENST00000495779 349 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.94□□□□□ -2.1
COL11A1P12107 AC121161.1-201ENST00000510606 652 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.94□□□□□ -2.1
COL11A1P12107 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
COL11A1P12107 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.94□□□□□ -2.1
COL11A1P12107 GLUD1P4-201ENST00000590914 418 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 AL009028.1-201ENST00000604895 802 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 AL163051.2-201ENST00000618976 735 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 AC024595.1-201ENST00000623088 387 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.94□□□□□ -2.1
COL11A1P12107 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.94□□□□□ -2.1
COL11A1P12107 RNU4-13P-201ENST00000364019 141 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 SNORD115-48-201ENST00000364764 76 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 RNU6-1181P-201ENST00000384191 106 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 SFR1P1-201ENST00000403720 688 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 MIR1303-201ENST00000408625 86 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 HMGB3P2-201ENST00000411913 584 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.94□□□□□ -2.1
COL11A1P12107 HMGB3P31-201ENST00000413333 595 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.94□□□□□ -2.1
COL11A1P12107 RABEPKP1-201ENST00000440529 1026 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 RPL23AP16-201ENST00000441715 421 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.94□□□□□ -2.1
COL11A1P12107 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.94□□□□□ -2.1
COL11A1P12107 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 USP9YP10-201ENST00000454868 628 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 AC078857.1-201ENST00000469870 667 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.94□□□□□ -2.1
COL11A1P12107 RPL23AP55-201ENST00000498163 452 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 AIG1P1-201ENST00000503376 148 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 MTCO3P27-201ENST00000514397 196 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 RNA5SP82-201ENST00000516707 92 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 NOP56P3-201ENST00000549457 385 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.94□□□□□ -2.1
COL11A1P12107 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.94□□□□□ -2.1
COL11A1P12107 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.94□□□□□ -2.1
COL11A1P12107 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.94□□□□□ -2.1
COL11A1P12107 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.94□□□□□ -2.1
COL11A1P12107 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.94□□□□□ -2.1
COL11A1P12107 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.94□□□□□ -2.1
COL11A1P12107 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.94□□□□□ -2.1
COL11A1P12107 AC006963.1-201ENST00000624003 1052 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.94□□□□□ -2.1
COL11A1P12107 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
COL11A1P12107 AL109809.4-201ENST00000603520 2185 ntBASIC1.93□□□□□ -2.1
COL11A1P12107 AL136520.1-201ENST00000600311 1322 ntBASIC1.93□□□□□ -2.1
COL11A1P12107 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
COL11A1P12107 MTATP6P31-201ENST00000406985 692 ntBASIC1.93□□□□□ -2.1
COL11A1P12107 BX664727.1-201ENST00000416024 466 ntBASIC1.93□□□□□ -2.1
COL11A1P12107 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.93□□□□□ -2.1
COL11A1P12107 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.93□□□□□ -2.1
COL11A1P12107 FCF1P6-201ENST00000456841 595 ntBASIC1.93□□□□□ -2.1
COL11A1P12107 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.93□□□□□ -2.1
COL11A1P12107 RPS29P12-201ENST00000460178 152 ntBASIC1.93□□□□□ -2.1
COL11A1P12107 RPS29P20-201ENST00000489592 171 ntBASIC1.93□□□□□ -2.1
COL11A1P12107 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.93□□□□□ -2.1
COL11A1P12107 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.93□□□□□ -2.1
COL11A1P12107 AC010376.1-201ENST00000522101 334 ntBASIC1.93□□□□□ -2.1
COL11A1P12107 AC022690.1-201ENST00000526681 550 ntBASIC1.93□□□□□ -2.1
COL11A1P12107 ARL2BPP2-201ENST00000550907 489 ntBASIC1.93□□□□□ -2.1
COL11A1P12107 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms