Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.05□□□□□ -2.08
TOP2AP11388 AC016957.1-201ENST00000534895 309 ntBASIC2.05□□□□□ -2.08
TOP2AP11388 MTCO1P40-201ENST00000574371 625 ntBASIC2.05□□□□□ -2.08
TOP2AP11388 AC123786.2-201ENST00000603459 275 ntBASIC2.05□□□□□ -2.08
TOP2AP11388 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
TOP2AP11388 SNORD114-26-201ENST00000363543 72 ntBASIC2.04□□□□□ -2.08
TOP2AP11388 AC092447.6-201ENST00000414578 210 ntBASIC2.04□□□□□ -2.08
TOP2AP11388 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.04□□□□□ -2.08
TOP2AP11388 SSXP4-201ENST00000451349 245 ntBASIC2.04□□□□□ -2.08
TOP2AP11388 AC009901.1-201ENST00000506703 541 ntBASIC2.04□□□□□ -2.08
TOP2AP11388 HMGB3P3-201ENST00000510526 400 ntBASIC2.04□□□□□ -2.08
TOP2AP11388 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.04□□□□□ -2.08
TOP2AP11388 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.04□□□□□ -2.08
TOP2AP11388 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.04□□□□□ -2.08
TOP2AP11388 AC002487.1-201ENST00000604565 994 ntBASIC2.04□□□□□ -2.08
TOP2AP11388 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.04□□□□□ -2.08
TOP2AP11388 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TOP2AP11388 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.03□□□□□ -2.08
TOP2AP11388 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.03□□□□□ -2.08
TOP2AP11388 RN7SKP265-201ENST00000516448 223 ntBASIC2.03□□□□□ -2.08
TOP2AP11388 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.03□□□□□ -2.08
TOP2AP11388 AC021755.4-201ENST00000616620 456 ntBASIC2.03□□□□□ -2.08
TOP2AP11388 AC025016.1-201ENST00000616746 682 ntBASIC2.03□□□□□ -2.08
TOP2AP11388 AC006338.1-201ENST00000618453 749 ntBASIC2.03□□□□□ -2.08
TOP2AP11388 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.02□□□□□ -2.09
TOP2AP11388 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.02□□□□□ -2.09
TOP2AP11388 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.02□□□□□ -2.09
TOP2AP11388 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.02□□□□□ -2.09
TOP2AP11388 AC024619.4-201ENST00000580924 316 ntBASIC2.02□□□□□ -2.09
TOP2AP11388 AC005296.1-201ENST00000616145 209 ntBASIC2.02□□□□□ -2.09
TOP2AP11388 AC009318.3-201ENST00000616916 503 ntBASIC2.02□□□□□ -2.09
TOP2AP11388 RNU6-234P-201ENST00000365229 104 ntBASIC2.01□□□□□ -2.09
TOP2AP11388 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
TOP2AP11388 MTND4LP13-201ENST00000425022 298 ntBASIC2.01□□□□□ -2.09
TOP2AP11388 SNRPFP2-201ENST00000440710 251 ntBASIC2.01□□□□□ -2.09
TOP2AP11388 AC092991.1-201ENST00000477176 376 ntBASIC2.01□□□□□ -2.09
TOP2AP11388 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
TOP2AP11388 AL359273.1-201ENST00000510918 627 ntBASIC2.01□□□□□ -2.09
TOP2AP11388 AC025918.2-201ENST00000558683 763 ntBASIC2.01□□□□□ -2.09
TOP2AP11388 AL138976.2-201ENST00000563989 694 ntBASIC2.01□□□□□ -2.09
TOP2AP11388 MIR4716-201ENST00000579628 84 ntBASIC2.01□□□□□ -2.09
TOP2AP11388 AC007229.1-201ENST00000590455 412 ntBASIC2.01□□□□□ -2.09
TOP2AP11388 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TOP2AP11388 MIR548J-201ENST00000408833 112 ntBASIC2.01□□□□□ -2.09
TOP2AP11388 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.01□□□□□ -2.09
TOP2AP11388 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
TOP2AP11388 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
TOP2AP11388 AC096992.1-201ENST00000459808 709 ntBASIC2.01□□□□□ -2.09
TOP2AP11388 AC087373.1-201ENST00000524920 491 ntBASIC2.01□□□□□ -2.09
TOP2AP11388 AC118942.1-201ENST00000529674 1035 ntBASIC2.01□□□□□ -2.09
TOP2AP11388 AC068135.2-201ENST00000569293 1028 ntBASIC2.01□□□□□ -2.09
TOP2AP11388 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.01□□□□□ -2.09
TOP2AP11388 MIR373-201ENST00000362273 69 ntBASIC2□□□□□ -2.09
TOP2AP11388 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
TOP2AP11388 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2□□□□□ -2.09
TOP2AP11388 TRAPPC2P9-201ENST00000434556 343 ntBASIC2□□□□□ -2.09
TOP2AP11388 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2□□□□□ -2.09
TOP2AP11388 RPL30P12-201ENST00000474666 353 ntBASIC2□□□□□ -2.09
TOP2AP11388 AC098583.1-201ENST00000480875 255 ntBASIC2□□□□□ -2.09
TOP2AP11388 RPS27P21-201ENST00000486977 252 ntBASIC2□□□□□ -2.09
TOP2AP11388 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2□□□□□ -2.09
TOP2AP11388 AP005660.1-201ENST00000522972 293 ntBASIC2□□□□□ -2.09
TOP2AP11388 AC009127.3-201ENST00000570531 403 ntBASIC2□□□□□ -2.09
TOP2AP11388 AC106028.5-201ENST00000610332 395 ntBASIC2□□□□□ -2.09
TOP2AP11388 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2□□□□□ -2.09
TOP2AP11388 AC138915.1-201ENST00000565427 1685 ntBASIC1.99□□□□□ -2.09
TOP2AP11388 AC016769.3-201ENST00000396562 315 ntBASIC1.99□□□□□ -2.09
TOP2AP11388 UBE2FP3-201ENST00000436366 524 ntBASIC1.99□□□□□ -2.09
TOP2AP11388 KATNBL1P3-201ENST00000443475 909 ntBASIC1.99□□□□□ -2.09
TOP2AP11388 AC092155.2-201ENST00000454675 477 ntBASIC1.99□□□□□ -2.09
TOP2AP11388 RPL21P104-201ENST00000464143 478 ntBASIC1.99□□□□□ -2.09
TOP2AP11388 RPS23P3-201ENST00000470993 430 ntBASIC1.99□□□□□ -2.09
TOP2AP11388 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.99□□□□□ -2.09
TOP2AP11388 MTCO1P47-201ENST00000523889 1271 ntBASIC1.99□□□□□ -2.09
TOP2AP11388 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
TOP2AP11388 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.99□□□□□ -2.09
TOP2AP11388 AC135776.4-201ENST00000624300 1904 ntBASIC1.98□□□□□ -2.09
TOP2AP11388 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.98□□□□□ -2.09
TOP2AP11388 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.98□□□□□ -2.09
TOP2AP11388 RPS26P56-201ENST00000444468 240 ntBASIC1.98□□□□□ -2.09
TOP2AP11388 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.98□□□□□ -2.09
TOP2AP11388 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
TOP2AP11388 MIR514B-201ENST00000516774 80 ntBASIC1.98□□□□□ -2.09
TOP2AP11388 AL161713.1-201ENST00000555538 145 ntBASIC1.98□□□□□ -2.09
TOP2AP11388 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.98□□□□□ -2.09
TOP2AP11388 AL109653.1-201ENST00000603091 248 ntBASIC1.98□□□□□ -2.09
TOP2AP11388 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
TOP2AP11388 RNU1-148P-201ENST00000384472 162 ntBASIC1.97□□□□□ -2.09
TOP2AP11388 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.97□□□□□ -2.09
TOP2AP11388 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.97□□□□□ -2.09
TOP2AP11388 AL590233.1-201ENST00000430017 456 ntBASIC1.97□□□□□ -2.09
TOP2AP11388 MTCO1P48-201ENST00000448024 1096 ntBASIC1.97□□□□□ -2.09
TOP2AP11388 AC087343.1-201ENST00000477341 475 ntBASIC1.97□□□□□ -2.09
TOP2AP11388 RNU6-711P-201ENST00000517255 106 ntBASIC1.97□□□□□ -2.09
TOP2AP11388 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.97□□□□□ -2.09
TOP2AP11388 SNRPEP10-201ENST00000420249 274 ntBASIC1.96□□□□□ -2.09
TOP2AP11388 RPL17P49-201ENST00000443728 411 ntBASIC1.96□□□□□ -2.09
TOP2AP11388 AL078601.1-201ENST00000444542 271 ntBASIC1.96□□□□□ -2.09
TOP2AP11388 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.96□□□□□ -2.09
TOP2AP11388 DUXAP5-201ENST00000529668 529 ntBASIC1.96□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms