Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC3.87□□□□□ -1.79
PF4V1P10720 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.87□□□□□ -1.79
PF4V1P10720 AC012512.1-201ENST00000446594 718 ntBASIC3.87□□□□□ -1.79
PF4V1P10720 RPL12P25-201ENST00000455592 494 ntBASIC3.87□□□□□ -1.79
PF4V1P10720 RN7SL860P-201ENST00000473738 223 ntBASIC3.87□□□□□ -1.79
PF4V1P10720 RN7SL812P-201ENST00000493791 279 ntBASIC3.87□□□□□ -1.79
PF4V1P10720 AC009901.1-201ENST00000506703 541 ntBASIC3.87□□□□□ -1.79
PF4V1P10720 AC079140.5-201ENST00000507882 310 ntBASIC3.87□□□□□ -1.79
PF4V1P10720 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PF4V1P10720 RNU2-69P-201ENST00000516061 100 ntBASIC3.87□□□□□ -1.79
PF4V1P10720 SNORA70.14-201ENST00000516205 110 ntBASIC3.87□□□□□ -1.79
PF4V1P10720 RNU6-928P-201ENST00000516876 104 ntBASIC3.87□□□□□ -1.79
PF4V1P10720 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.87□□□□□ -1.79
PF4V1P10720 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.87□□□□□ -1.79
PF4V1P10720 AC134698.4-201ENST00000523451 826 ntBASIC3.87□□□□□ -1.79
PF4V1P10720 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.87□□□□□ -1.79
PF4V1P10720 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.87□□□□□ -1.79
PF4V1P10720 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.87□□□□□ -1.79
PF4V1P10720 MIR4737-201ENST00000583979 81 ntBASIC3.87□□□□□ -1.79
PF4V1P10720 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.87□□□□□ -1.79
PF4V1P10720 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.87□□□□□ -1.79
PF4V1P10720 AC103710.3-201ENST00000608157 948 ntBASIC3.87□□□□□ -1.79
PF4V1P10720 U2.17-201ENST00000611454 95 ntBASIC3.87□□□□□ -1.79
PF4V1P10720 AC022418.1-201ENST00000624118 445 ntBASIC3.87□□□□□ -1.79
PF4V1P10720 AC009033.1-201ENST00000624279 431 ntBASIC3.87□□□□□ -1.79
PF4V1P10720 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PF4V1P10720 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PF4V1P10720 SCN1A-220ENST00000641603 12506 ntBASIC3.87□□□□□ -1.79
PF4V1P10720 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PF4V1P10720 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.87□□□□□ -1.79
PF4V1P10720 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PF4V1P10720 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.87□□□□□ -1.79
PF4V1P10720 LARP1BP1-201ENST00000506036 1359 ntBASIC3.87□□□□□ -1.79
PF4V1P10720 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PF4V1P10720 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PF4V1P10720 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC3.86□□□□□ -1.79
PF4V1P10720 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PF4V1P10720 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.86□□□□□ -1.79
PF4V1P10720 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PF4V1P10720 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PF4V1P10720 Y_RNA.390-201ENST00000383932 102 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 RNU6-332P-201ENST00000391193 108 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 RNU6-876P-201ENST00000391295 104 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 AL356776.1-201ENST00000406574 447 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 RNA5SP38-201ENST00000410750 119 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 FAR2P2-201ENST00000413041 594 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 AL590139.1-201ENST00000416267 400 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 AC009161.1-201ENST00000417306 376 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.86□□□□□ -1.79
PF4V1P10720 RPL23AP82-202ENST00000427528 469 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 DNAJC19P7-201ENST00000428811 344 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC3.86□□□□□ -1.79
PF4V1P10720 SETP5-201ENST00000437270 562 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 HMGN2P20-201ENST00000437531 273 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 MTATP6P23-201ENST00000440153 476 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 AL450023.3-201ENST00000440592 271 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 MTCO2P3-201ENST00000442543 421 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 HSFY6P-201ENST00000445573 403 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.86□□□□□ -1.79
PF4V1P10720 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.86□□□□□ -1.79
PF4V1P10720 VN1R34P-201ENST00000447387 883 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 AL360271.2-201ENST00000447710 161 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.86□□□□□ -1.79
PF4V1P10720 RNU7-167P-201ENST00000459160 62 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 RNU6-1208P-201ENST00000459588 107 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 RPL23AP62-201ENST00000463396 453 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 RPL7AP28-201ENST00000464513 571 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 RN7SL481P-201ENST00000477764 299 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 HMGB1P30-201ENST00000492455 606 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 AC022493.1-201ENST00000492984 337 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 AC018710.1-201ENST00000506509 158 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PF4V1P10720 AC105031.1-201ENST00000518550 476 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 AC009902.1-201ENST00000519351 183 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.86□□□□□ -1.79
PF4V1P10720 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.86□□□□□ -1.79
PF4V1P10720 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.86□□□□□ -1.79
PF4V1P10720 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PF4V1P10720 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.86□□□□□ -1.79
PF4V1P10720 OR11H5P-201ENST00000554039 926 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 AC040958.1-201ENST00000561102 201 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 MIR4474-201ENST00000579189 78 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 MIR548S-201ENST00000581352 82 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
PF4V1P10720 SLC25A36P1-201ENST00000590111 465 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 U6.42-201ENST00000618440 107 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 AC007546.1-201ENST00000619452 559 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.86□□□□□ -1.79
PF4V1P10720 AC073308.1-201ENST00000623696 305 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PF4V1P10720 AC068254.2-201ENST00000623938 3577 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 MTND4P35-201ENST00000604257 1375 ntBASIC3.86□□□□□ -1.79
PF4V1P10720 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.86□□□□□ -1.79
PF4V1P10720 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC3.86□□□□□ -1.79
PF4V1P10720 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.86□□□□□ -1.79
PF4V1P10720 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.86□□□□□ -1.79
PF4V1P10720 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.86□□□□□ -1.79
PF4V1P10720 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PF4V1P10720 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.85□□□□□ -1.79
PF4V1P10720 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms