Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AL035410.1-201ENST00000427409 427 ntBASIC1.6□□□□□ -2.15
FREM3P0C091 AC114973.1-201ENST00000429057 632 ntBASIC1.6□□□□□ -2.15
FREM3P0C091 FABP5P3-201ENST00000437960 408 ntBASIC1.6□□□□□ -2.15
FREM3P0C091 AL139109.1-201ENST00000455491 297 ntBASIC1.6□□□□□ -2.15
FREM3P0C091 RNU7-26P-201ENST00000458980 63 ntBASIC1.6□□□□□ -2.15
FREM3P0C091 AC015908.1-201ENST00000478739 476 ntBASIC1.6□□□□□ -2.15
FREM3P0C091 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.6□□□□□ -2.15
FREM3P0C091 OR5BM1P-201ENST00000512021 366 ntBASIC1.6□□□□□ -2.15
FREM3P0C091 RNU6-27P-201ENST00000516146 107 ntBASIC1.6□□□□□ -2.15
FREM3P0C091 RNA5SP364-201ENST00000516938 78 ntBASIC1.6□□□□□ -2.15
FREM3P0C091 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.6□□□□□ -2.15
FREM3P0C091 EEF1B2P4-201ENST00000551398 348 ntBASIC1.6□□□□□ -2.15
FREM3P0C091 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.6□□□□□ -2.15
FREM3P0C091 MIR3935-201ENST00000583472 104 ntBASIC1.6□□□□□ -2.15
FREM3P0C091 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
FREM3P0C091 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
FREM3P0C091 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.6□□□□□ -2.15
FREM3P0C091 RNU6-730P-201ENST00000383954 104 ntBASIC1.6□□□□□ -2.15
FREM3P0C091 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
FREM3P0C091 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
FREM3P0C091 RNA5SP56-201ENST00000410277 118 ntBASIC1.6□□□□□ -2.15
FREM3P0C091 RN7SKP101-201ENST00000411376 320 ntBASIC1.6□□□□□ -2.15
FREM3P0C091 AC079780.1-201ENST00000428259 207 ntBASIC1.6□□□□□ -2.15
FREM3P0C091 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.6□□□□□ -2.15
FREM3P0C091 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.6□□□□□ -2.15
FREM3P0C091 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
FREM3P0C091 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.6□□□□□ -2.15
FREM3P0C091 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.6□□□□□ -2.15
FREM3P0C091 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.6□□□□□ -2.15
FREM3P0C091 AC245884.12-201ENST00000615364 59 ntBASIC1.6□□□□□ -2.15
FREM3P0C091 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.6□□□□□ -2.15
FREM3P0C091 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.6□□□□□ -2.15
FREM3P0C091 AC009487.4-201ENST00000624969 3585 ntBASIC1.59□□□□□ -2.15
FREM3P0C091 UBE2L2-201ENST00000254302 429 ntBASIC1.59□□□□□ -2.15
FREM3P0C091 Y_RNA.118-201ENST00000363300 101 ntBASIC1.59□□□□□ -2.15
FREM3P0C091 RNU6-339P-201ENST00000384310 107 ntBASIC1.59□□□□□ -2.15
FREM3P0C091 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
FREM3P0C091 AL357078.2-201ENST00000416486 427 ntBASIC1.59□□□□□ -2.15
FREM3P0C091 AC009414.1-201ENST00000427200 443 ntBASIC1.59□□□□□ -2.15
FREM3P0C091 Z82205.1-201ENST00000428456 297 ntBASIC1.59□□□□□ -2.15
FREM3P0C091 AC108667.1-201ENST00000428618 249 ntBASIC1.59□□□□□ -2.15
FREM3P0C091 AC009237.8-201ENST00000445492 379 ntBASIC1.59□□□□□ -2.15
FREM3P0C091 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.59□□□□□ -2.15
FREM3P0C091 AC010099.1-201ENST00000455434 375 ntBASIC1.59□□□□□ -2.15
FREM3P0C091 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.59□□□□□ -2.15
FREM3P0C091 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.59□□□□□ -2.15
FREM3P0C091 AC108729.3-201ENST00000513484 108 ntBASIC1.59□□□□□ -2.15
FREM3P0C091 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.59□□□□□ -2.15
FREM3P0C091 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.59□□□□□ -2.15
FREM3P0C091 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.59□□□□□ -2.15
FREM3P0C091 AC139103.1-201ENST00000534696 1030 ntBASIC1.59□□□□□ -2.15
FREM3P0C091 AC007115.1-201ENST00000546853 234 ntBASIC1.59□□□□□ -2.15
FREM3P0C091 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
FREM3P0C091 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.59□□□□□ -2.15
FREM3P0C091 AC017104.5-201ENST00000637647 639 ntBASIC1.59□□□□□ -2.15
FREM3P0C091 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.16
FREM3P0C091 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
FREM3P0C091 SNORD82-201ENST00000365530 70 ntBASIC1.58□□□□□ -2.16
FREM3P0C091 AC019129.1-201ENST00000403786 261 ntBASIC1.58□□□□□ -2.16
FREM3P0C091 Z86062.1-201ENST00000406773 777 ntBASIC1.58□□□□□ -2.16
FREM3P0C091 RPS3AP9-201ENST00000417027 792 ntBASIC1.58□□□□□ -2.16
FREM3P0C091 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.58□□□□□ -2.16
FREM3P0C091 AC004022.1-201ENST00000447766 1066 ntBASIC1.58□□□□□ -2.16
FREM3P0C091 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.58□□□□□ -2.16
FREM3P0C091 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.58□□□□□ -2.16
FREM3P0C091 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.58□□□□□ -2.16
FREM3P0C091 CDC42P4-201ENST00000510507 563 ntBASIC1.58□□□□□ -2.16
FREM3P0C091 RN7SKP219-201ENST00000516825 296 ntBASIC1.58□□□□□ -2.16
FREM3P0C091 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.58□□□□□ -2.16
FREM3P0C091 CBX3P4-201ENST00000538909 354 ntBASIC1.58□□□□□ -2.16
FREM3P0C091 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.58□□□□□ -2.16
FREM3P0C091 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.58□□□□□ -2.16
FREM3P0C091 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.58□□□□□ -2.16
FREM3P0C091 AC084768.2-201ENST00000622736 221 ntBASIC1.58□□□□□ -2.16
FREM3P0C091 AC027309.3-201ENST00000623419 351 ntBASIC1.58□□□□□ -2.16
FREM3P0C091 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.58□□□□□ -2.16
FREM3P0C091 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.58□□□□□ -2.16
FREM3P0C091 RNU6-989P-201ENST00000362756 107 ntBASIC1.58□□□□□ -2.16
FREM3P0C091 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.58□□□□□ -2.16
FREM3P0C091 MIR1287-201ENST00000408492 90 ntBASIC1.58□□□□□ -2.16
FREM3P0C091 AL512504.1-201ENST00000415494 778 ntBASIC1.58□□□□□ -2.16
FREM3P0C091 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.58□□□□□ -2.16
FREM3P0C091 USP9YP15-201ENST00000442391 422 ntBASIC1.58□□□□□ -2.16
FREM3P0C091 AC124916.1-201ENST00000444020 547 ntBASIC1.58□□□□□ -2.16
FREM3P0C091 AMD1P1-201ENST00000457220 922 ntBASIC1.58□□□□□ -2.16
FREM3P0C091 AC135721.1-201ENST00000497954 479 ntBASIC1.58□□□□□ -2.16
FREM3P0C091 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.58□□□□□ -2.16
FREM3P0C091 RNA5SP182-201ENST00000516064 82 ntBASIC1.58□□□□□ -2.16
FREM3P0C091 AP000942.3-201ENST00000603702 160 ntBASIC1.58□□□□□ -2.16
FREM3P0C091 NUTF2P8-201ENST00000604593 363 ntBASIC1.58□□□□□ -2.16
FREM3P0C091 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.58□□□□□ -2.16
FREM3P0C091 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.58□□□□□ -2.16
FREM3P0C091 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.58□□□□□ -2.16
FREM3P0C091 ZNF355P-201ENST00000427301 3216 ntBASIC1.58□□□□□ -2.16
FREM3P0C091 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
FREM3P0C091 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
FREM3P0C091 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
FREM3P0C091 RNU6-198P-201ENST00000384258 104 ntBASIC1.57□□□□□ -2.16
FREM3P0C091 MIR518E-201ENST00000385252 88 ntBASIC1.57□□□□□ -2.16
FREM3P0C091 MT-TC-201ENST00000387405 66 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms