Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CD48P09326 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.27□□□□□ -1.89
CD48P09326 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CD48P09326 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CD48P09326 RNU6-359P-201ENST00000365466 108 ntBASIC3.27□□□□□ -1.89
CD48P09326 RNU5A-6P-201ENST00000384136 116 ntBASIC3.27□□□□□ -1.89
CD48P09326 RNU6-809P-201ENST00000384461 107 ntBASIC3.27□□□□□ -1.89
CD48P09326 RPS20P2-201ENST00000402520 389 ntBASIC3.27□□□□□ -1.89
CD48P09326 SNORA11.2-201ENST00000408318 127 ntBASIC3.27□□□□□ -1.89
CD48P09326 FCF1P9-201ENST00000412546 282 ntBASIC3.27□□□□□ -1.89
CD48P09326 AC004987.3-201ENST00000413879 771 ntBASIC3.27□□□□□ -1.89
CD48P09326 RAD23BP2-201ENST00000416003 1207 ntBASIC3.27□□□□□ -1.89
CD48P09326 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.27□□□□□ -1.89
CD48P09326 AC104651.1-201ENST00000427559 735 ntBASIC3.27□□□□□ -1.89
CD48P09326 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.27□□□□□ -1.89
CD48P09326 AL353705.1-201ENST00000433468 480 ntBASIC3.27□□□□□ -1.89
CD48P09326 MTND3P21-201ENST00000433774 331 ntBASIC3.27□□□□□ -1.89
CD48P09326 RABEPKP1-201ENST00000440529 1026 ntBASIC3.27□□□□□ -1.89
CD48P09326 Z82190.1-201ENST00000454534 490 ntBASIC3.27□□□□□ -1.89
CD48P09326 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.27□□□□□ -1.89
CD48P09326 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.27□□□□□ -1.89
CD48P09326 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CD48P09326 RPL7P49-201ENST00000471402 708 ntBASIC3.27□□□□□ -1.89
CD48P09326 ST13P14-201ENST00000474095 734 ntBASIC3.27□□□□□ -1.89
CD48P09326 AC105252.1-201ENST00000503089 286 ntBASIC3.27□□□□□ -1.89
CD48P09326 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.27□□□□□ -1.89
CD48P09326 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.27□□□□□ -1.89
CD48P09326 MTCO3P44-201ENST00000510977 541 ntBASIC3.27□□□□□ -1.89
CD48P09326 AC091133.4-201ENST00000511142 308 ntBASIC3.27□□□□□ -1.89
CD48P09326 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.27□□□□□ -1.89
CD48P09326 RN7SKP234-201ENST00000517173 224 ntBASIC3.27□□□□□ -1.89
CD48P09326 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.27□□□□□ -1.89
CD48P09326 RPL21P5-201ENST00000554662 472 ntBASIC3.27□□□□□ -1.89
CD48P09326 AC090615.1-201ENST00000577519 154 ntBASIC3.27□□□□□ -1.89
CD48P09326 MTATP6P3-201ENST00000581686 676 ntBASIC3.27□□□□□ -1.89
CD48P09326 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.27□□□□□ -1.89
CD48P09326 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.27□□□□□ -1.89
CD48P09326 AC103710.1-201ENST00000610003 901 ntBASIC3.27□□□□□ -1.89
CD48P09326 AL591516.1-201ENST00000611326 274 ntBASIC3.27□□□□□ -1.89
CD48P09326 AC091834.1-201ENST00000614543 472 ntBASIC3.27□□□□□ -1.89
CD48P09326 SNORA50A-202ENST00000629536 136 ntBASIC3.27□□□□□ -1.89
CD48P09326 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CD48P09326 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CD48P09326 MTND5P26-201ENST00000426018 1752 ntBASIC3.27□□□□□ -1.89
CD48P09326 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.27□□□□□ -1.89
CD48P09326 AC093831.2-201ENST00000624393 3427 ntBASIC3.26□□□□□ -1.89
CD48P09326 AC027514.1-201ENST00000588561 1603 ntBASIC3.26□□□□□ -1.89
CD48P09326 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CD48P09326 FARSBP1-201ENST00000435808 1778 ntBASIC3.26□□□□□ -1.89
CD48P09326 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CD48P09326 FRG1BP-201ENST00000278882 761 ntBASIC3.26□□□□□ -1.89
CD48P09326 RNA5SP258-201ENST00000362750 119 ntBASIC3.26□□□□□ -1.89
CD48P09326 U3.6-201ENST00000363622 211 ntBASIC3.26□□□□□ -1.89
CD48P09326 U3.29-201ENST00000391296 212 ntBASIC3.26□□□□□ -1.89
CD48P09326 RPL7P25-201ENST00000404151 721 ntBASIC3.26□□□□□ -1.89
CD48P09326 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.26□□□□□ -1.89
CD48P09326 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.26□□□□□ -1.89
CD48P09326 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.26□□□□□ -1.89
CD48P09326 OR2B8P-201ENST00000432841 938 ntBASIC3.26□□□□□ -1.89
CD48P09326 AC009961.2-201ENST00000435771 251 ntBASIC3.26□□□□□ -1.89
CD48P09326 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.26□□□□□ -1.89
CD48P09326 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.26□□□□□ -1.89
CD48P09326 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.26□□□□□ -1.89
CD48P09326 RPS12P18-201ENST00000442381 270 ntBASIC3.26□□□□□ -1.89
CD48P09326 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.26□□□□□ -1.89
CD48P09326 GAPDHP17-201ENST00000449858 1001 ntBASIC3.26□□□□□ -1.89
CD48P09326 KLF3P2-201ENST00000465138 268 ntBASIC3.26□□□□□ -1.89
CD48P09326 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.26□□□□□ -1.89
CD48P09326 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CD48P09326 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.26□□□□□ -1.89
CD48P09326 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.26□□□□□ -1.89
CD48P09326 MTCO2P4-201ENST00000517968 247 ntBASIC3.26□□□□□ -1.89
CD48P09326 IGKV2D-36-201ENST00000518643 226 ntBASIC3.26□□□□□ -1.89
CD48P09326 OR5G4P-201ENST00000525251 760 ntBASIC3.26□□□□□ -1.89
CD48P09326 AP003122.4-201ENST00000530980 758 ntBASIC3.26□□□□□ -1.89
CD48P09326 PTP4A1P6-201ENST00000531034 478 ntBASIC3.26□□□□□ -1.89
CD48P09326 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.26□□□□□ -1.89
CD48P09326 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.26□□□□□ -1.89
CD48P09326 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.26□□□□□ -1.89
CD48P09326 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.26□□□□□ -1.89
CD48P09326 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.26□□□□□ -1.89
CD48P09326 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.26□□□□□ -1.89
CD48P09326 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.26□□□□□ -1.89
CD48P09326 AL606834.2-201ENST00000602954 668 ntBASIC3.26□□□□□ -1.89
CD48P09326 AC025588.3-201ENST00000604182 274 ntBASIC3.26□□□□□ -1.89
CD48P09326 AL022154.1-201ENST00000604698 785 ntBASIC3.26□□□□□ -1.89
CD48P09326 AL009028.1-201ENST00000604895 802 ntBASIC3.26□□□□□ -1.89
CD48P09326 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.26□□□□□ -1.89
CD48P09326 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.26□□□□□ -1.89
CD48P09326 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.26□□□□□ -1.89
CD48P09326 MIR7112-201ENST00000616126 65 ntBASIC3.26□□□□□ -1.89
CD48P09326 AC012314.7-201ENST00000619693 93 ntBASIC3.26□□□□□ -1.89
CD48P09326 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.26□□□□□ -1.89
CD48P09326 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.26□□□□□ -1.89
CD48P09326 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CD48P09326 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CD48P09326 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CD48P09326 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CD48P09326 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD48P09326 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms