Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.04□□□□□ -1.76
RHOP08100 OR8L1P-201ENST00000534005 955 ntBASIC4.04□□□□□ -1.76
RHOP08100 AC123904.3-201ENST00000547218 814 ntBASIC4.04□□□□□ -1.76
RHOP08100 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.04□□□□□ -1.76
RHOP08100 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.04□□□□□ -1.76
RHOP08100 RNA5SP108-201ENST00000605921 117 ntBASIC4.04□□□□□ -1.76
RHOP08100 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.04□□□□□ -1.76
RHOP08100 AC006020.1-201ENST00000420179 1854 ntBASIC4.04□□□□□ -1.76
RHOP08100 MAPK10-372ENST00000641954 3413 ntBASIC4.04□□□□□ -1.76
RHOP08100 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RHOP08100 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.04□□□□□ -1.76
RHOP08100 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
RHOP08100 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
RHOP08100 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RHOP08100 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RHOP08100 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RHOP08100 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.03□□□□□ -1.76
RHOP08100 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RHOP08100 HSPE1P11-201ENST00000339579 310 ntBASIC4.03□□□□□ -1.76
RHOP08100 Y_RNA.22-201ENST00000362492 102 ntBASIC4.03□□□□□ -1.76
RHOP08100 RNU6-511P-201ENST00000363496 107 ntBASIC4.03□□□□□ -1.76
RHOP08100 Y_RNA.367-201ENST00000365544 101 ntBASIC4.03□□□□□ -1.76
RHOP08100 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RHOP08100 RNU6-767P-201ENST00000384132 107 ntBASIC4.03□□□□□ -1.76
RHOP08100 Y_RNA.535-201ENST00000384612 99 ntBASIC4.03□□□□□ -1.76
RHOP08100 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RHOP08100 AL136116.1-201ENST00000403591 381 ntBASIC4.03□□□□□ -1.76
RHOP08100 RNU6-1068P-201ENST00000410958 103 ntBASIC4.03□□□□□ -1.76
RHOP08100 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.03□□□□□ -1.76
RHOP08100 AC016831.2-201ENST00000417179 352 ntBASIC4.03□□□□□ -1.76
RHOP08100 PDSS1P1-201ENST00000422953 1114 ntBASIC4.03□□□□□ -1.76
RHOP08100 MTND1P14-201ENST00000427400 950 ntBASIC4.03□□□□□ -1.76
RHOP08100 RPS20P5-201ENST00000434808 360 ntBASIC4.03□□□□□ -1.76
RHOP08100 RPL23AP83-201ENST00000434984 473 ntBASIC4.03□□□□□ -1.76
RHOP08100 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.03□□□□□ -1.76
RHOP08100 RPL29P29-201ENST00000448725 423 ntBASIC4.03□□□□□ -1.76
RHOP08100 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.03□□□□□ -1.76
RHOP08100 RNU7-59P-201ENST00000459101 61 ntBASIC4.03□□□□□ -1.76
RHOP08100 RN7SL585P-201ENST00000470538 280 ntBASIC4.03□□□□□ -1.76
RHOP08100 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.03□□□□□ -1.76
RHOP08100 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.03□□□□□ -1.76
RHOP08100 RPL38P4-201ENST00000502376 214 ntBASIC4.03□□□□□ -1.76
RHOP08100 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.03□□□□□ -1.76
RHOP08100 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.03□□□□□ -1.76
RHOP08100 AC006499.6-201ENST00000511169 607 ntBASIC4.03□□□□□ -1.76
RHOP08100 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.03□□□□□ -1.76
RHOP08100 HIGD1AP3-201ENST00000515857 278 ntBASIC4.03□□□□□ -1.76
RHOP08100 AC022695.1-201ENST00000522089 237 ntBASIC4.03□□□□□ -1.76
RHOP08100 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.03□□□□□ -1.76
RHOP08100 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.03□□□□□ -1.76
RHOP08100 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.03□□□□□ -1.76
RHOP08100 ARL2BPP2-201ENST00000550907 489 ntBASIC4.03□□□□□ -1.76
RHOP08100 SRGNP1-201ENST00000603392 451 ntBASIC4.03□□□□□ -1.76
RHOP08100 AC128687.2-201ENST00000609657 566 ntBASIC4.03□□□□□ -1.76
RHOP08100 AC006329.2-201ENST00000611491 394 ntBASIC4.03□□□□□ -1.76
RHOP08100 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.03□□□□□ -1.76
RHOP08100 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RHOP08100 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RHOP08100 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RHOP08100 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RHOP08100 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
RHOP08100 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.03□□□□□ -1.76
RHOP08100 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RHOP08100 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RHOP08100 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.03□□□□□ -1.77
RHOP08100 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.02□□□□□ -1.77
RHOP08100 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
RHOP08100 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
RHOP08100 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.02□□□□□ -1.77
RHOP08100 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.02□□□□□ -1.77
RHOP08100 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.02□□□□□ -1.77
RHOP08100 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RHOP08100 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RHOP08100 RPL7P26-201ENST00000333817 754 ntBASIC4.02□□□□□ -1.77
RHOP08100 Y_RNA.255-201ENST00000364581 97 ntBASIC4.02□□□□□ -1.77
RHOP08100 RNU4-48P-201ENST00000365559 182 ntBASIC4.02□□□□□ -1.77
RHOP08100 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
RHOP08100 MIR558-201ENST00000384920 94 ntBASIC4.02□□□□□ -1.77
RHOP08100 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
RHOP08100 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RHOP08100 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RHOP08100 HMGN1P24-201ENST00000412282 298 ntBASIC4.02□□□□□ -1.77
RHOP08100 RPS29P4-201ENST00000414733 161 ntBASIC4.02□□□□□ -1.77
RHOP08100 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.02□□□□□ -1.77
RHOP08100 MED13P1-201ENST00000428342 171 ntBASIC4.02□□□□□ -1.77
RHOP08100 RPS17P13-201ENST00000448974 407 ntBASIC4.02□□□□□ -1.77
RHOP08100 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.02□□□□□ -1.77
RHOP08100 AL049714.1-201ENST00000466686 347 ntBASIC4.02□□□□□ -1.77
RHOP08100 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.02□□□□□ -1.77
RHOP08100 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RHOP08100 FGF7P4-201ENST00000509595 295 ntBASIC4.02□□□□□ -1.77
RHOP08100 TMEM248P1-201ENST00000510579 951 ntBASIC4.02□□□□□ -1.77
RHOP08100 AC104619.4-201ENST00000510773 249 ntBASIC4.02□□□□□ -1.77
RHOP08100 VWA8P1-201ENST00000510889 176 ntBASIC4.02□□□□□ -1.77
RHOP08100 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.02□□□□□ -1.77
RHOP08100 IGKV2D-36-201ENST00000518643 226 ntBASIC4.02□□□□□ -1.77
RHOP08100 AP000857.1-201ENST00000532151 543 ntBASIC4.02□□□□□ -1.77
RHOP08100 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.02□□□□□ -1.77
RHOP08100 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.02□□□□□ -1.77
RHOP08100 AL138976.2-201ENST00000563989 694 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms