Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HLA-DQB2P05538 MTCO1P40-201ENST00000574371 625 ntBASIC2.01□□□□□ -2.09
HLA-DQB2P05538 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.01□□□□□ -2.09
HLA-DQB2P05538 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.01□□□□□ -2.09
HLA-DQB2P05538 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.01□□□□□ -2.09
HLA-DQB2P05538 AC040174.2-201ENST00000602701 465 ntBASIC2.01□□□□□ -2.09
HLA-DQB2P05538 AC013444.2-201ENST00000603317 787 ntBASIC2.01□□□□□ -2.09
HLA-DQB2P05538 KATNBL1P5-201ENST00000605015 517 ntBASIC2.01□□□□□ -2.09
HLA-DQB2P05538 AL136363.1-201ENST00000605349 337 ntBASIC2.01□□□□□ -2.09
HLA-DQB2P05538 VN1R9P-201ENST00000614184 867 ntBASIC2.01□□□□□ -2.09
HLA-DQB2P05538 AC104307.1-201ENST00000616142 196 ntBASIC2.01□□□□□ -2.09
HLA-DQB2P05538 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
HLA-DQB2P05538 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2□□□□□ -2.09
HLA-DQB2P05538 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2□□□□□ -2.09
HLA-DQB2P05538 DEFB108F-201ENST00000344638 222 ntBASIC2□□□□□ -2.09
HLA-DQB2P05538 RNU6-582P-201ENST00000362989 107 ntBASIC2□□□□□ -2.09
HLA-DQB2P05538 OR1L1-202ENST00000373686 1083 ntBASIC2□□□□□ -2.09
HLA-DQB2P05538 RNU6-301P-201ENST00000384277 107 ntBASIC2□□□□□ -2.09
HLA-DQB2P05538 RNU6-253P-201ENST00000384730 105 ntBASIC2□□□□□ -2.09
HLA-DQB2P05538 MIR135A2-201ENST00000384854 100 ntBASIC2□□□□□ -2.09
HLA-DQB2P05538 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HLA-DQB2P05538 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2□□□□□ -2.09
HLA-DQB2P05538 AC008173.1-201ENST00000418901 264 ntBASIC2□□□□□ -2.09
HLA-DQB2P05538 ACTR3BP6-201ENST00000422332 1241 ntBASIC2□□□□□ -2.09
HLA-DQB2P05538 ZFAND6P1-201ENST00000434138 605 ntBASIC2□□□□□ -2.09
HLA-DQB2P05538 AC024082.2-201ENST00000434771 238 ntBASIC2□□□□□ -2.09
HLA-DQB2P05538 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HLA-DQB2P05538 AL714022.1-201ENST00000439897 151 ntBASIC2□□□□□ -2.09
HLA-DQB2P05538 RPL32P28-201ENST00000443577 397 ntBASIC2□□□□□ -2.09
HLA-DQB2P05538 RFC5P1-201ENST00000454419 874 ntBASIC2□□□□□ -2.09
HLA-DQB2P05538 RBM43P1-201ENST00000476891 1081 ntBASIC2□□□□□ -2.09
HLA-DQB2P05538 AC116337.2-201ENST00000477662 156 ntBASIC2□□□□□ -2.09
HLA-DQB2P05538 MTAPP1-201ENST00000489154 819 ntBASIC2□□□□□ -2.09
HLA-DQB2P05538 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2□□□□□ -2.09
HLA-DQB2P05538 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2□□□□□ -2.09
HLA-DQB2P05538 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2□□□□□ -2.09
HLA-DQB2P05538 RNU6-885P-201ENST00000516607 104 ntBASIC2□□□□□ -2.09
HLA-DQB2P05538 IGLV3-17-201ENST00000519099 244 ntBASIC2□□□□□ -2.09
HLA-DQB2P05538 DEFB108D-201ENST00000527787 222 ntBASIC2□□□□□ -2.09
HLA-DQB2P05538 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2□□□□□ -2.09
HLA-DQB2P05538 MIR3921-201ENST00000577308 85 ntBASIC2□□□□□ -2.09
HLA-DQB2P05538 MIR5694-201ENST00000581190 76 ntBASIC2□□□□□ -2.09
HLA-DQB2P05538 OR1M4P-201ENST00000589199 287 ntBASIC2□□□□□ -2.09
HLA-DQB2P05538 AC013412.1-201ENST00000610687 192 ntBASIC2□□□□□ -2.09
HLA-DQB2P05538 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
HLA-DQB2P05538 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2□□□□□ -2.09
HLA-DQB2P05538 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2□□□□□ -2.09
HLA-DQB2P05538 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DQB2P05538 Z82209.1-201ENST00000422141 2135 ntBASIC1.99□□□□□ -2.09
HLA-DQB2P05538 RNA5SP138-201ENST00000365098 114 ntBASIC1.99□□□□□ -2.09
HLA-DQB2P05538 RNA5SP88-201ENST00000365560 109 ntBASIC1.99□□□□□ -2.09
HLA-DQB2P05538 AL355615.1-201ENST00000406187 641 ntBASIC1.99□□□□□ -2.09
HLA-DQB2P05538 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.99□□□□□ -2.09
HLA-DQB2P05538 RNU6-193P-201ENST00000410977 107 ntBASIC1.99□□□□□ -2.09
HLA-DQB2P05538 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DQB2P05538 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.99□□□□□ -2.09
HLA-DQB2P05538 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.99□□□□□ -2.09
HLA-DQB2P05538 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.99□□□□□ -2.09
HLA-DQB2P05538 DPPA3P1-201ENST00000448050 469 ntBASIC1.99□□□□□ -2.09
HLA-DQB2P05538 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.99□□□□□ -2.09
HLA-DQB2P05538 snoU13.28-201ENST00000459235 104 ntBASIC1.99□□□□□ -2.09
HLA-DQB2P05538 RNU6-775P-201ENST00000459318 96 ntBASIC1.99□□□□□ -2.09
HLA-DQB2P05538 RPL31P41-201ENST00000477967 372 ntBASIC1.99□□□□□ -2.09
HLA-DQB2P05538 RPL38P4-201ENST00000502376 214 ntBASIC1.99□□□□□ -2.09
HLA-DQB2P05538 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.99□□□□□ -2.09
HLA-DQB2P05538 AC113155.1-201ENST00000511141 769 ntBASIC1.99□□□□□ -2.09
HLA-DQB2P05538 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.99□□□□□ -2.09
HLA-DQB2P05538 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.99□□□□□ -2.09
HLA-DQB2P05538 RNU5A-7P-201ENST00000515979 116 ntBASIC1.99□□□□□ -2.09
HLA-DQB2P05538 SNORA76.2-201ENST00000517095 137 ntBASIC1.99□□□□□ -2.09
HLA-DQB2P05538 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.99□□□□□ -2.09
HLA-DQB2P05538 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DQB2P05538 AC015688.2-201ENST00000584523 262 ntBASIC1.99□□□□□ -2.09
HLA-DQB2P05538 RN7SL622P-201ENST00000585292 275 ntBASIC1.99□□□□□ -2.09
HLA-DQB2P05538 AC105224.1-201ENST00000587055 421 ntBASIC1.99□□□□□ -2.09
HLA-DQB2P05538 AC079791.1-201ENST00000605356 973 ntBASIC1.99□□□□□ -2.09
HLA-DQB2P05538 AC025588.4-201ENST00000615802 908 ntBASIC1.99□□□□□ -2.09
HLA-DQB2P05538 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DQB2P05538 CR848007.1-201ENST00000442354 1699 ntBASIC1.99□□□□□ -2.09
HLA-DQB2P05538 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-DQB2P05538 AC092881.1-201ENST00000638218 2733 ntBASIC1.98□□□□□ -2.09
HLA-DQB2P05538 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-DQB2P05538 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-DQB2P05538 RNU6-461P-201ENST00000364195 107 ntBASIC1.98□□□□□ -2.09
HLA-DQB2P05538 MTCO2P31-201ENST00000402702 684 ntBASIC1.98□□□□□ -2.09
HLA-DQB2P05538 AL158050.1-201ENST00000416077 457 ntBASIC1.98□□□□□ -2.09
HLA-DQB2P05538 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.98□□□□□ -2.09
HLA-DQB2P05538 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DQB2P05538 AC241584.1-201ENST00000438469 1241 ntBASIC1.98□□□□□ -2.09
HLA-DQB2P05538 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DQB2P05538 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DQB2P05538 AC092798.1-201ENST00000458542 409 ntBASIC1.98□□□□□ -2.09
HLA-DQB2P05538 AL049714.1-201ENST00000466686 347 ntBASIC1.98□□□□□ -2.09
HLA-DQB2P05538 AC025181.1-201ENST00000477507 416 ntBASIC1.98□□□□□ -2.09
HLA-DQB2P05538 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.98□□□□□ -2.09
HLA-DQB2P05538 AC147055.4-201ENST00000504399 745 ntBASIC1.98□□□□□ -2.09
HLA-DQB2P05538 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-DQB2P05538 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DQB2P05538 AC118282.2-201ENST00000508739 374 ntBASIC1.98□□□□□ -2.09
HLA-DQB2P05538 AL359273.1-201ENST00000510918 627 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms